Planctomyces sp. SH-PL14: VT03_03360
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Entry
VT03_03360 CDS
T04354
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00300
Lysine biosynthesis
pls00470
D-Amino acid metabolism
pls01100
Metabolic pathways
pls01110
Biosynthesis of secondary metabolites
pls01120
Microbial metabolism in diverse environments
pls01230
Biosynthesis of amino acids
Module
pls_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VT03_03360 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VT03_03360 (dapF)
Enzymes [BR:
pls01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VT03_03360 (dapF)
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Motif
Pfam:
DAP_epimerase
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AMV16901
UniProt:
A0A142WQH7
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Position
827637..828485
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AA seq
282 aa
AA seq
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MRFTKMHGAGNDYVYVNCFAEPVPADIPATAIAVSDRHFGIGGDGLVLIGPSDKADARMR
MFNADGSEAEMCGNAVRCVAKFVHDHGICRKDELRIETGRGVLTLQLLVEGGSVHRVRVN
MSSPILRSADIPTTLPGDPPVRAPLEVAGRKLEVTCVSMGNPHCVTFVDQITDEWVHGVG
PQIEKHPAFPRKINAEFVQVLSRSEINMRVWERGSGETLACGTGACASAVAAILNGLCDR
TVLCHLPGGDLTLEWSEGGDVFMTGPATEVFSGVWNPSGAVR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcaccaagatgcacggggcgggcaatgactacgtctatgtcaattgcttcgcc
gagccggttcccgccgatatccccgccaccgcgatcgccgtcagcgaccgccacttcggg
atcggcggcgacggcctcgtcctgatcgggccgtccgataaggcggacgcccggatgcgg
atgttcaacgccgacgggagcgaggccgaaatgtgcggcaacgccgtccggtgtgtcgcc
aagttcgtccacgaccacggcatctgccggaaggacgaactccggatcgaaacggggcgc
ggcgtcctcacgctccagctgcttgtcgaaggagggagcgtccatcgcgtccgcgtcaac
atgtcgtcgccgatcctcaggagtgccgacatcccgacaacgctccccggcgatccaccg
gtccgggcgccgctcgaagtcgcgggccgcaagctggaagtgacctgcgtctcgatgggg
aatccccactgcgtcacgttcgtcgaccagatcaccgacgaatgggtccacggcgtcggc
ccgcagatcgagaagcaccccgccttccctcggaagatcaacgccgagttcgtgcaggtg
ctctcacgcagcgagatcaacatgcgggtctgggagcggggaagcggcgagacgctggcc
tgtggaaccggggcctgcgcgtcggccgtcgcggcgattctcaatggtctctgcgaccgg
accgtcctgtgccacctcccaggcggcgatctgactctggagtggtccgaagggggagat
gtcttcatgaccggtccggcgaccgaagtcttctcgggggtctggaacccgagcggggcg
gttcgctag
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