Planctomyces sp. SH-PL14: VT03_04540
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Entry
VT03_04540 CDS
T04354
Symbol
outD_1
Name
(GenBank) Type II secretion system protein D precursor
KO
K02280
pilus assembly protein CpaC
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VT03_04540 (outD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pls02044
]
VT03_04540 (outD_1)
02035 Bacterial motility proteins [BR:
pls02035
]
VT03_04540 (outD_1)
Secretion system [BR:
pls02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
VT03_04540 (outD_1)
Bacterial motility proteins [BR:
pls02035
]
Pilus system
Pilus assembly proteins
VT03_04540 (outD_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
AMV17135
LinkDB
All DBs
Position
1123264..1125159
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AA seq
631 aa
AA seq
DB search
MRTSLFRKVSRGLAACALSTWGLMHTAYAQEPLPPQPQPPPSLEGAGGVRPTSAPANAAD
VRGGEHVFTIAQQKSRISIIQLQSRVLELPNRITVVKDFNEETLEVTALASNRVLVFAKA
PGATSITLVDEFDNAYTVDVFVEADVRELQAYMERLFPGSAIEVIALRDSVVLRGWVTEP
DRIPQMIAVAKQFYANVHNQMQVGGVTQVQLHVKVLEVQRSRLQRMGINWLGVGQNFYVH
SAPGALAPLTNAAIAPGQIPAPIVGAQGITNSAVQFAVTGTNGFFQAFVDALRTENLAKV
LAEPVLVVNSGRPATMLSGGEFPVLVPGSVGTTTIQFREFGVRMEAVPIVLGNGRLRLDI
APEVSERDVQNAVSVNGFVVPGIVTRRVNTQVEMRFGETLMIGGLISRRKVGTTNKLPFF
GELPWVGAAFRRTNFEWGETELLILVTPHMAAPMQACQVPFPGIGYNSDDPTDIELYADG
MLEVPYYGPDCPDGACPVPGAMPAPGPAPYGAPPLAAPVAAPPVSPEAAAPIPSGEEVIP
APPAANPPTSADAEDPAAQGPALIERTSGSGVSANRSQAIPIGEMTNPFPGRRTDARNTK
KTTEKESRSTETRPSSRAMPGLIGPRKGSPP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacctcactcttccggaaggtctcacgcggattggcggcctgcgcgctgtcgacg
tggggactcatgcacaccgcatacgcgcaggagcctcttccgccgcaaccgcagcccccc
ccttccctggaaggggccgggggcgtcagacccacctcggcgccggccaacgccgccgat
gtgcgcggcggcgagcacgtctttacgatcgctcaacagaagtcccggatcagcatcatc
cagctccagtcgcgggtcttggagcttccgaaccggatcaccgtcgtcaaggacttcaac
gaagagacgctggaagtcacggcactcgcttcgaaccgggttctcgtcttcgccaaagcc
cccggtgccacctcgatcacgctcgtcgatgagttcgacaacgcctacacggtcgacgtc
ttcgtcgaggcggacgtccgcgagctgcaggcctacatggagcggctgttccccggatcc
gcgatcgaagtcatcgcgctgcgggacagcgtcgtcctccgcgggtgggtcacggaaccg
gaccgcatcccgcagatgatcgcggtcgccaagcagttctacgccaacgtccacaaccag
atgcaggtgggcggcgtcacgcaggtccagctccacgtcaaggtgctggaagtccagcgg
tcgcggctgcagcggatgggaatcaactggctgggcgtcggccagaacttctacgtgcac
agcgctccgggggccctcgcgccgctcaccaacgccgccatcgcgccgggacagattccg
gcccccatcgtgggagcccaggggatcacgaactcggccgtccagttcgccgtcaccggc
accaacggcttcttccaggcgttcgtcgacgccctccgcaccgaaaacctggccaaggtc
ctggccgagccggtcctcgtcgtcaacagcggccgccccgccacgatgctctccggcggt
gagttcccggtcctcgtccccggcagcgtcgggacgacgacgatccagttccgcgagttc
ggcgtccggatggaagcggtcccgatcgtcctcggcaacggccggctccggctggacatc
gcgccggaagtgagcgagcgggacgtgcagaacgcggtcagcgtgaacggcttcgtcgtc
cccggcatcgtgacccgccgggtcaacacgcaggtcgagatgcggttcggcgagacgctg
atgatcggcgggctgatctcgcgccggaaagtcggaacgacgaacaagctccccttcttc
ggcgagctgccgtgggtcggggcggccttccgccggaccaacttcgaatggggcgagacc
gagctcctgattctcgtgacgccgcacatggcggcgccgatgcaggcctgccaggtcccg
ttcccagggatcggctacaactccgacgacccgaccgacatcgagctctatgccgacggc
atgctggaggtcccgtactacggtccggactgcccggacggggcctgcccggttccgggc
gcgatgcccgcccccggcccggctccctacggtgctccgccgctcgccgctccggtcgcc
gccccgccggtctctcccgaagccgcggctccgatcccctcgggtgaagaagtgatcccg
gctccgccggccgccaatcccccgacctcggccgacgccgaggaccccgccgcccagggg
ccggccctgatcgaacggacgtcgggatcgggtgtttcggccaaccgcagccaggcgatc
cccatcggggagatgacgaaccccttcccgggtcgtcggacggacgccaggaacaccaag
aagacgactgaaaaggaatcgcgctctacggagacccgcccgtcgtccagagccatgccg
gggttgatcggcccgcggaagggctctccaccgtga
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