Planctomyces sp. SH-PL14: VT03_04800
Help
Entry
VT03_04800 CDS
T04354
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pls03032
]
VT03_04800 (gyrB_1)
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_04800 (gyrB_1)
Enzymes [BR:
pls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VT03_04800 (gyrB_1)
DNA replication proteins [BR:
pls03032
]
Prokaryotic type
DNA Topoisomerases
VT03_04800 (gyrB_1)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VT03_04800 (gyrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AMV17187
UniProt:
A0A142WR05
LinkDB
All DBs
Position
complement(1199779..1202358)
Genome browser
AA seq
859 aa
AA seq
DB search
MSDTPETPQSQPEPAKSEAKKGEKKSADYGANTIRHLEGIEGIRHRPAMYIGGTDLVGLH
HLLFEVTDNVLDEFVNGFAKTLSVTVNADGSVTIVDDGRGIPVGTMEGKNRSALEVVFTE
IHAGGKFDREAYATGTGGLHGVGITAVNACSEWVEVEVRREGHVWTMEFSRGKMTAPLSK
LGSTEQTGTKITFKPDPQIFPVTAFVYDTIHKKLQDCAFLNPGIRVFIKDERSGQSDTFY
YEDGLREFVRWLNRTETPLFQDVIRITTQVENIGVDIALQWNDGYSETVRCYANGIYNPE
GGTHASGFRTGMTRTLNNYGKKEGVYKDFTPAGEDYREGLAAVITVRIPNPQFESQTKIK
LTNAEVDGAVNSAVGDGLAKFFEENPAIAKLVAQKGLKAAEAREAAKRARDLARDKSKVS
GGGLPEKLRDCRNHDLKVSELYLVEGDSAGGSADTGRDSATQAILPLRGKILNVEKAQLV
KVLGNTEVAAIFKAIGIPPTAEETDINKRRYGKIILMTDADVDGSHIRTLLLTFIFRHMR
ELVKQGAVYVAQPPLYRVLQKNRKNQKPRYVQTHEEMMTELLNLGLEGSKLVIKPRINLL
AKRVSSLTERTESREISGADLRQLADLMNTLEEPLESLERRGLNLRSLAMQFATPDGLLP
RYRIFLGSEQHWFQTKADVDSFLEEKQKQIGTELKVADAPLVPTGEPAQAEGESAAIAVA
DFHEMRSINDGIKRLQSEFGLSLNDLLPAAPLNGEPVYPYEVEQDSNPRRLVSLRHLITL
LRDMSSKVLTYTRFKGLGEMNPDELYETAMDPETRILKRINLEDAAAAEEIFRVLMGESV
EPRREFIEKHALDVKDLDI
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatacgcctgagacccctcaatcccaaccggaaccggcgaagtcggaagccaag
aagggtgagaaaaagtcggcggattacggggccaacacgatccgccacctggaggggatc
gaggggattcgccaccgcccggcgatgtacatcggcgggaccgatctcgtcggtctgcat
cacctcctgttcgaagtcacggacaacgtcctcgacgagttcgtcaacggcttcgccaag
acgctctcggtgacggtcaacgccgacggctcggtcacgatcgtcgacgacggccgcggg
attccggtcgggacgatggaggggaagaaccgttcggccctggaagtcgtcttcaccgag
atccacgccgggggcaagttcgaccgcgaggcgtacgccaccgggaccgggggacttcac
ggcgtcgggatcacggcggtcaacgcctgcagcgagtgggtggaagtcgaagtccgtcgg
gaagggcacgtctggacgatggagttctcgcgcggaaagatgaccgcgccgctgtcgaag
ctcggctccacggagcagaccgggaccaagatcacgttcaagcccgacccgcagatcttc
ccggtgacggcgttcgtttacgacacgatccacaagaagctgcaggactgcgcattcctg
aaccccgggattcgggtcttcatcaaggacgagcgttccggccagtccgacaccttctac
tacgaggacggcctccgggagtttgtccgctggctgaaccggaccgagacgccgttgttc
caggacgtgatccggatcacgactcaggtggagaacatcggcgtcgatatcgccctgcag
tggaacgacgggtactccgagaccgtccgctgctatgcgaacgggatctacaatccggaa
ggggggacgcacgccagcggcttccggaccggcatgacccggacgctgaacaactacggg
aagaaggaaggggtttacaaggattttacgccggccggtgaagactaccgcgaaggcctg
gcggcggtgatcacggtccggatcccgaacccgcagttcgagtcccagaccaagatcaag
ctgacgaatgccgaagtcgacggcgcggtgaactccgccgtcggcgacggcctcgcgaag
ttcttcgaagagaacccggcgatcgccaagctcgtggcccagaaggggctcaaggcggcg
gaggcccgcgaggcggccaagcgggctcgcgacctcgcccgcgacaagagcaaggtctcc
ggcggcggacttccggagaagcttcgcgactgccgcaaccacgacctcaaggtctcggag
ctgtacctggtggaaggggactcggccggtggctcggccgatacgggccgcgactccgcc
acgcaggcgatcctgccgctccgcggaaagatcctgaacgtcgaaaaggcccagctcgtc
aaggtgctggggaatacggaagtcgccgcgatcttcaaggcgatcggcatcccgccgacg
gccgaagagaccgacatcaacaagcggcggtacggcaagatcatcctgatgaccgacgcc
gacgtggacggctcgcatatccggacgctgctcctgaccttcatcttccggcacatgcgg
gagctcgtgaagcagggagcggtttatgtcgcccagccgccgctctatcgcgtgctccag
aagaaccgcaagaaccagaagccgcggtacgtccagacgcacgaagagatgatgaccgag
cttctgaacctcgggcttgaggggtcgaagctggtcatcaagccgcggatcaacctcctg
gcgaagcgggtttccagcctgacggagcgaaccgagagccgggagatctccggggcggac
cttcgccagctcgcagacctcatgaatactcttgaggagccgctggaatcgcttgagcgc
cgcggtctcaacctgcggtcgctggcgatgcagttcgccacgccggacggtcttctgccg
cggtaccggatcttcctgggcagcgagcagcactggttccagaccaaggccgatgtcgat
tcgttcctggaagagaagcagaagcagatcggcacggaactcaaggtcgccgatgctccg
ctcgtcccgacgggcgagccggcgcaggcggaaggggagtcggcggcgattgcggttgct
gatttccacgagatgcggagcatcaacgatgggatcaagcggctgcagtcggagttcggt
ctgtcgctgaatgacctgcttccggcggctccgctgaacggcgagccggtctatccgtac
gaggtcgagcaggacagcaatccgcggcggctcgtgagtctgcggcatctcattacgctg
ctgcgggacatgagcagcaaggttctgacctacacccgcttcaaggggctgggggaaatg
aacccggacgagctgtatgagacggcgatggatccggagacgcggattctgaagcggatc
aatctcgaagacgcggctgcggcggaggagattttccgggtgttgatgggtgagagtgtg
gaaccgcgtcgcgagtttattgagaagcacgcgctggatgtgaaggacctcgatatctag
DBGET
integrated database retrieval system
