Planctomyces sp. SH-PL14: VT03_05265
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Entry
VT03_05265 CDS
T04354
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03410
Base excision repair
pls03430
Mismatch repair
pls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT03_05265 (recJ)
03430 Mismatch repair
VT03_05265 (recJ)
03440 Homologous recombination
VT03_05265 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_05265 (recJ)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
VT03_05265 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VT03_05265 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VT03_05265 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMV17279
UniProt:
A0A142WR41
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All DBs
Position
1326270..1328111
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AA seq
613 aa
AA seq
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MPDRWKFAPHDRAVVGRIVQELRCSPLLAHVLASRGVLNGQDAKVFLDAKMNDLHPPAQL
PGIDAAADRVVAALQANRRITIYGDYDVDGVTATSILWHCLKLAGGRVDYYIPCRLEEGY
GLNCEAIRKLHEEDPERLVVTVDCGICSVEEAALARQLGLELIITDHHTMLEQLPDAAVL
VHPRLPGSTYPFMDLCGAGVAFKLAWAVCQRLGDGERATPAMREFLKSAVALAAIGTVAD
VVPLVGENRILVKFGLEVLGRYNDKKTKKVEQPIPGLEMLIKIAGLGENTLFTAEDIGFS
IGPRINAAGRLGQARLAVELLTTYNRQRAAQLADYLDQLNKERQTVERKMFKQARELVDE
HPEWADHPALVLAHPEWHPGVIGVLASRMVEQYRKPAIMIAMNDAEKLGQGSGRSYGGFD
LHAGLTACGEHLVGYGGHKYAAGLRVQADRLDAFRLAFIEHMTANKSNVVSEKEIYVDAE
VALADLTNKAMTELETLGPFGSQHSKPVFAATRCELVEPPKKIGGGERHLSFKVRQFNKI
IRGIAFGRAEWADEMAACPGPISICFAPGFNRYKGYESVELQLIDWQPDPSTVNPFAKSA
PAPAAEEGVSTAV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcgctggaagttcgccccgcacgaccgggcggtggtggggcgcattgtgcag
gagctgcgctgctctccgctcctggcccacgtgctggcctcgcgcggcgtgctgaacgga
caggacgccaaggtcttcctcgacgcgaagatgaacgaccttcatccgccggcccagctc
cccgggatcgacgccgcggccgaccgggtcgtcgccgcgctccaggccaaccgccggatc
acgatctacggcgactacgacgtcgacggtgtcaccgccaccagcatcctctggcactgc
ctcaagctcgccggcggacgcgtcgactactacatcccctgccggctcgaagaaggctac
ggcctcaattgcgaggcgatccgcaagctccacgaagaggaccccgagcggctggtggtc
acggtcgactgcgggatctgcagcgtcgaagaggcggccctcgcccgtcagctcggactc
gagctgattatcaccgaccaccacacgatgctggagcagcttccggacgcggcggtcctc
gtccatccgcggctccccggcagcacgtatcctttcatggacctgtgcggcgcgggagtc
gccttcaagctcgcctgggcagtctgccagcggctgggggacggcgagcgggcgacgccg
gcgatgcgggagttcctcaagtccgccgtcgccctggcggcgatcgggaccgtggcggac
gtcgttccgctcgtcggcgagaaccggatcctcgtgaagttcgggctggaggtcctcggg
cggtacaacgacaagaagacaaagaaagtcgagcagccgatccccggcctggagatgctg
atcaagatcgccggcctgggggagaacacgctgttcaccgccgaggacatcggcttcagc
atcggtccccgaatcaacgccgccggacggctcggccaggcgcggctcgccgtcgagctc
ctgacgacctacaaccgccagcgggccgcccagctcgcggactacctcgaccagctcaac
aaggagcgacagacggtcgagcggaagatgttcaagcaggcgcgggaactcgtcgacgag
cacccggagtgggccgaccatcccgccctcgtcctagcccatccggaatggcatcccggt
gtgatcggggtcctggcgagccggatggtcgaacaataccgcaagccggcgatcatgatc
gccatgaacgacgcggagaagctcggccaggggagcggacggtcctacggcggcttcgac
ctgcacgccggcctgaccgcctgcggcgaacacctcgtcggatacggcgggcacaagtac
gccgccggtctgcgggtccaggcggaccgcctcgacgcgttccggctggcgttcatcgaa
cacatgaccgccaataaatcgaacgtggtctccgagaaagagatttacgtcgacgccgag
gtcgcgctggcggacctgaccaacaaggcgatgacggagctggagacgctcgggccgttc
ggatcgcagcattcgaagccggtcttcgcggcgacgcggtgcgagctcgtcgagccgccg
aagaagatcggcggcggagagcggcacctctcgttcaaggtccgccagttcaacaagatc
atccgcggcatcgccttcgggcgggccgagtgggcggacgagatggcggcctgtccggga
ccgatctcgatctgcttcgccccgggtttcaaccggtacaaggggtacgaatcggtcgag
ctccagctcatcgactggcagccggatccctcgaccgtgaatccgttcgccaagtctgct
cccgccccggccgcggaagagggtgtctcgacggccgtctga
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