Planctomyces sp. SH-PL14: VT03_05320
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Entry
VT03_05320 CDS
T04354
Symbol
appA
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VT03_05320 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pls02000
]
VT03_05320 (appA)
Transporters [BR:
pls02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VT03_05320 (appA)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMV17290
UniProt:
A0A142WT10
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All DBs
Position
complement(1340700..1342721)
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AA seq
673 aa
AA seq
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MRMMRRRLVALGLLSGFLVPLIGCDSPSPPAAPPSSSALSDKEPSAAPPKSGDSPPPAAP
MSETAAPAADPSGGKVTIFKQTEKVPPLEELEKRVEWGDSPIVDYRKHLADYLATKPQKT
SAADALKLRNTSAEINAQILDGLGRPPAAEGDLDDTTPFNRHIPADIKSTNPLMQSSVYE
GYLLNLTGIGFFSFDWKLEPGAVSDTVVSWQTSKDKLYDKVVMRSDLTWSDGKPITAHDV
VFTYEVIMTDDIPIPAVRTGMEKIKWVHAYDDHTFVIAHRESLVTNVWNMNFPVIPKHVY
EKTIPEDKTLVSSPAHVKLEDEPVVGGAYRIVKRLKGQEILLERREEYYMQNGKQIREKP
RFKTVRLRVLEDRNTALLAFKNGDIEDIELQPNQWVTQTTDDEFYRLGTKVRGTEWTYYY
FGWNTKTPFFSDARVRKAMSYAMDYRELLEDLTYGLYEQSVGEFHPTSWMAPATPRTPYK
QDLDKAEDLLDEAGWVDNDNDGVREKVIGGKKVKFEFEIMCANDDLRIKTCTILKKNLEN
IGVRCNVRPTEFTVLQEKAQKHEFEAQFAGWGTGTDPSTTENLWKTGEQRNYTQYSNPEV
DKLFDEGRKEFDLEKRKAVYRKIDEILWEEQPYTWLYYRSSFYGFNKRLRGYMFSPRGPY
SYSPGVDAFWAVK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgatgagacggcggctcgttgctctcggacttctctccggttttctcgtcccg
ctcatcggctgcgactcgccgtcccctccggcagctcccccttcttcgtccgctctgtcg
gacaaggagccctccgccgctccccccaagtccggggattcgccgccgcccgccgccccg
atgtccgagaccgcggctcccgcggctgacccgtcgggcggaaaggtgacgatcttcaaa
cagaccgagaaggttccccctctcgaagaactggaaaagagggtcgagtggggcgacagc
ccgatcgtcgactaccgcaagcatctcgcggactacctcgcgacgaagccccagaagacc
tcggcggcggacgccctcaagctgcggaacacgagcgccgagatcaacgcccagatcttg
gacggcctgggacgccccccggccgcggaaggagacctcgacgacacaacgccgttcaac
cggcatattccggcggacatcaagtcgaccaatccgctgatgcagagttcggtctacgaa
ggctatctcctgaacctgaccgggatcgggttcttctccttcgactggaaacttgagccc
ggcgcggtctccgacacggtcgtctcctggcagaccagcaaggacaagctgtacgacaag
gtcgtgatgcggagcgacctgacttggagcgacggcaagccgatcacggctcatgacgtc
gtcttcacctacgaagtcatcatgacggacgacattccgattccggcggtccggaccggg
atggagaagatcaagtgggtccacgcctatgacgaccacacgttcgtcatcgcccaccgg
gagtcgctcgtcacgaacgtctggaacatgaacttccccgtcatcccgaagcacgtctat
gagaagacgattccggaagacaagacgctcgtcagctctccggcccatgtgaagctggaa
gacgagccggttgtcggcggcgcctaccgcatcgtcaagcggctcaaggggcaggagatc
ctcctggagcgccgcgaagagtactacatgcagaatggcaagcagatccgcgagaagccc
cgcttcaagacggtccggctccgcgttctggaggaccgcaacaccgctctcctggcgttc
aagaacggcgacatcgaagacatcgagttgcagcccaaccagtgggtgacgcagacgacg
gacgacgagttctaccggctggggaccaaggtccgcggcacggaatggacgtactactac
ttcggctggaacaccaagacccccttcttctccgacgcccgggtccgtaaggcgatgtcc
tatgcgatggactaccgcgagctgctcgaggacctgacctacgggctctacgaacagtcg
gtcggcgagttccacccgacgtcgtggatggcccccgcgacgccgcggacgccctacaaa
caggacctcgacaaggcggaagacctgctcgatgaagcgggctgggtcgacaacgacaac
gacggcgtccgcgagaaagtgatcggcggcaagaaggtgaagttcgagtttgagatcatg
tgcgcgaacgacgatctgcggatcaagacctgcacgatcctcaagaagaacctggagaac
atcggcgtccgctgcaacgtccgtccgaccgagttcaccgtcctgcaggagaaggcccag
aagcacgaattcgaggcccagtttgccggatggggaaccgggaccgatcccagcaccacc
gagaacctctggaagaccggcgagcagcggaactacacgcagtactcgaatcccgaagtc
gacaagctgttcgacgaagggcggaaggagttcgacctcgagaagcggaaggcggtgtac
cgcaagatcgacgagatcctctgggaagagcagccttacacctggctctactaccgcagc
tccttctacggcttcaacaagcggctccgggggtacatgttcagtccccgcggtccctac
agctacagccccggcgtcgatgcgttctgggcggtgaagtga
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