Planctomyces sp. SH-PL14: VT03_05585
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Entry
VT03_05585 CDS
T04354
Symbol
rluA
Name
(GenBank) Ribosomal large subunit pseudouridine synthase A
KO
K07146
UPF0176 protein
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
VT03_05585 (rluA)
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Gene cluster
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Motif
Pfam:
PseudoU_synth_2
UPF0176_N
Rhodanese
Rhodanese_C
Motif
Other DBs
NCBI-ProteinID:
AMV17342
UniProt:
A0A142WSC4
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Position
complement(1409087..1410874)
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AA seq
595 aa
AA seq
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MSDVVNIAAYRFASLCDLKPLRERLLTFSKEQALKGTILLSPEGINLFVAGERTAVDSLV
ALLRAIPGLEDLAPKYSESEGQPFRRMLVRIKKEIIAFGVPGIDPARRTSPKLPAKELKQ
WLDEGRPVTLLDTRNDYEVKLGTFTNAVTLGLDHFRNFPKAVDSLPPDWKERPIVMFCTG
GIRCEKAGPYMEQAGFQQIYQLDGGILKYFEEVGGDHYQGECFVFDQRVGVDPALSETDN
TQCFECLTPLTAEDQADPRYVPGTSCPYCFLTTEEQMTRRIAERQAAIVAIAVHPPGSVP
YENVRPFNIPLDQDGRTLLEALTATFDHVPTENWAAVFAEGRFVDAGGQPVHPDRIVRAG
DRYEQRMPATVEPPVSLDIRILHEDEAIVVVDKPAPLPVHPCGRFHRHTLQNVLNDVYAP
QKVRPVHRLDANTTGVLVLARSRHFASRIQPQFEDGRVEKRYLARVEGHPSQDRFACDAP
ISAEAGEFGGRTVDEGGLPARTEFEVLERFADGTSLVSVRPLTGRTNQIRIHLWHLGHSI
VGEQSYLPGRRLGEVQTRGIDDAPLCLHASEIAFVHPLTRELVTFRAASPAWAVQ
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtcgtcaatatcgccgcctatcgcttcgcgtctctctgcgatctcaagccc
ctgcgcgaacgcctgctgaccttcagcaaggaacaggccctgaaagggacgattctgctg
agcccggaagggatcaatctcttcgtggccggcgagcggaccgcggtcgattctctggtc
gcgctcctccgggcgatcccgggtctcgaagacctcgctccgaaatacagcgagagcgaa
ggtcagccgttccggcggatgctcgtccggatcaaaaaggagatcatcgccttcggtgtt
ccggggatcgatccggcgcggcggacttcgcccaagctgccggcgaaggaactgaagcag
tggctcgacgaaggccgccctgtcacgctgctcgacacgcggaacgactacgaggtgaag
ctcggaacgtttacgaacgccgtcacgctcggtctcgaccacttccggaattttccgaag
gcggtcgactcgctccctcccgactggaaggagcggccgatcgtcatgttctgcacgggc
ggcatccgctgtgagaaggcggggccgtacatggaacaggcggggttccagcagatctat
cagctcgacggcgggatcctgaagtacttcgaggaagtcggcggggatcactatcaggga
gagtgttttgtcttcgaccagcgggtcggcgtcgatccggccctctcggagaccgacaac
acgcagtgcttcgagtgcctgaccccgctcacggccgaggaccaggccgacccgcggtac
gtccccggcacgtcgtgcccgtactgcttcctgacgaccgaagagcagatgacccggcgg
attgccgagcggcaggcggcgattgttgcgatcgccgtccatcctccgggaagcgtcccg
tacgagaatgtccggcccttcaacattccgctcgaccaggacgggcggacgctgctggag
gcgctgacggcgacgttcgaccatgttccgacggagaactgggcggcggtctttgcggag
gggcggtttgtcgacgccggcggacaaccggtccatcctgaccgaatcgtccgggcgggg
gaccggtatgagcagcggatgccggcgaccgtcgagccgccggtctccctcgacatccgg
atcctgcatgaggacgaagcgatcgttgtcgtcgacaagcccgcgccgctgccggtccat
ccctgcggccggttccaccgccacacgctgcagaatgttctgaacgacgtctacgcgccg
cagaaggtccgccccgtccaccggctcgacgccaacaccaccggcgttctggttctggct
cgcagccggcatttcgccagccggatccagcctcagttcgaagacggtcgcgtcgagaag
cgatacctcgcccgggtcgagggacatccttcgcaggaccggttcgcctgcgatgccccg
atcagcgcggaggcgggagagttcggaggacggacggtcgacgaagggggcctgccggcc
cggacggagttcgaggttctcgaacggtttgccgacggcacatcgctcgtcagcgttcgc
ccgctgacgggccggacgaaccagatccggatccacctatggcacctcgggcactcgatc
gtcggggaacagagctatctccccggccgccggctcggcgaagttcagactcgcgggatc
gacgatgccccgctgtgcctgcacgccagcgagatcgccttcgtccatcccctcacccgc
gagctggtcacgttccgcgcggcgagtccggcctgggccgtccagtag
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