Planctomyces sp. SH-PL14: VT03_06500
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Entry
VT03_06500 CDS
T04354
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pls03110
]
VT03_06500 (clpC)
Chaperones and folding catalysts [BR:
pls03110
]
Heat shock proteins
HSP100
VT03_06500 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
Sigma54_activat
AAA_16
AAA_22
UVR
ATPase_2
TniB
AAA_7
AAA_14
nSTAND3
AAA_3
Mg_chelatase
NACHT
TsaE
DNA_pol3_delta2
IstB_IS21
Zeta_toxin
T2SSE
ABC_tran
Torsin
LUC7
AAA_24
ResIII
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AMV17523
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Position
1630351..1632912
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AA seq
853 aa
AA seq
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MYERFTDRARKVMQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLDVDLRKIR
LEVEKIVQSGPDILAIGKLPQTPRAKKVIEYAMEEARNLNHNYVGTEHLLLGLLREQEGV
AAQVLMNLGLKLEDVREEVLNLLGHGIEQSETQERGGAAQQGKANKSKTPALDSFGRDLT
ELARGSKLDPVIGRTNEIERVIQILCRRQKNNPVLLGEAGVGKTAIVEGFAQMVVEGNVP
EILRDRRIVVLDLAMMVAGTKYRGQFEERIKAVMNEVRRAKNIILFIDELHTLVGAGGAE
GAIDASNVLKPALSRGEMQCIGATTLDEYRKYIEKDAALERRFQSVMVDPPGKDQAVEIL
KGLKDRYESHHRVQYTDDALEKAVELSNRYITGRCLPDKAIDVIDEAGARIRLKSMVRPP
DLKDLEEEIERLNAQKEEAVASQDFEKAASLRDSADKLKKKKENINREWRQKSKETDGVV
DAEVIAEVVAKMTGVPLTRMSSEDTVRLLEMEKELHKRVVSQDQAIKVVCKAVRRARAGL
KDPKRPMAAFLFSGPTGVGKTLLAKTLAEFMFGDEEALIQIDMSEYQERHNVSRLIGAPP
GYVGYEEGGQLTEKIRRRPYAVVLLDEIEKAHPDVYNMLLQIMEEGRLTDSFGRKVDFKN
VILIMTTNVGAKSIASSPFGFRTVANEVQEHDKMKTNVMAEISRVFKPEFIGRLDEIVVF
QKLTDENMRQVVDIELSKVRNRLKERGLTLRLSDEAKQLVIDKTHADGERDNVDYGARPL
RRSIEMYVEDPLSEELLRGVFQGKNLITVKVREVGTEKQFDFEGAVDDSLGVDAAPELAT
AGASSDETESGSN
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaacgctttactgaccgtgccagaaaggtcatgcagctggccaaccaggaagcg
cagcggttcaaccacgaatacatcggaactgaacacatcctcctgggcctggtgaaagaa
ggctcgggggtcgctgcgaacgtcctcaagaacctcgacgtcgatctccgcaagatccgt
ctcgaagtcgaaaagatcgtccagtccggaccggacatcctggccatcggcaagctgccg
cagacgccgcgggccaagaaggtcatcgagtacgcgatggaagaggcccggaacctcaac
cacaactacgtcgggaccgagcacctcctcctcggcctcctccgcgaacaggaaggggtc
gccgcccaggtcctgatgaacctcggcctcaagctggaagacgtccgcgaggaagtcctc
aacctgctcggccacggcatcgaacagtccgaaacgcaggagcggggcggcgccgcccag
caggggaaagccaacaagagcaagacccccgctctcgacagcttcggccgcgacctgacg
gaactcgcccgcggctccaagctcgacccggtcatcggccggacgaacgagatcgagcgc
gtcatccagatcctctgccgccgccagaagaacaacccggttctcctcggtgaagcaggc
gtcggtaagacggcgatcgtcgaagggttcgcccagatggtcgtcgaagggaacgtgccc
gagatcctccgcgaccgccggatcgtcgtcctcgacctcgccatgatggtcgccggcacg
aagtaccgcggccagttcgaggagcggatcaaggcggtcatgaacgaagtccgccgggcg
aagaacatcatcctgttcatcgacgagctccacacgcttgtcggggccgggggagcggaa
ggggcgatcgacgcctcgaacgtcctcaagccggctctctcccgcggcgagatgcagtgc
atcggtgcgacgaccctcgacgagtaccgcaagtacatcgagaaggacgccgccctcgaa
cgccgcttccagtcggtcatggtcgacccgccgggcaaggaccaggcggtcgagatcctg
aaaggccttaaggaccgttacgagagccaccaccgtgtccagtacacggacgacgccctc
gagaaggcggtcgagctgtcgaaccggtacatcaccggccgctgcctgccggacaaggcg
atcgacgtcatcgacgaagcgggtgcccgcatccgtctgaagtcgatggtccgtccgccg
gatctgaaggacctggaagaagagatcgagcgcctcaacgcccagaaggaagaggcggtc
gccagccaggacttcgaaaaggcggcctcgctccgcgactcggccgacaagctcaagaag
aagaaggaaaacatcaaccgcgaatggcggcagaagtccaaggagaccgatggcgtcgtc
gacgccgaggtcatcgcggaagtcgtcgccaagatgaccggcgtgcccctgacgcgcatg
tcgagcgaggacaccgtccgtctgctcgagatggagaaggagctgcacaagcgggtcgtg
agccaggatcaggcgatcaaggtcgtctgcaaggcggtccgccgggcccgtgccggcctc
aaggaccccaagcggccgatggcggccttcctgttctccggtccgaccggggttggaaag
acgctgcttgccaagacgctcgccgagttcatgttcggtgacgaagaggccctcatccag
atcgatatgagcgagtaccaggagcggcacaacgtgagccgcctcatcggtgccccgccg
ggatatgtcggttacgaagagggtggtcagctcacggagaagatccgtcgccggccgtac
gcggtcgtcctcctcgacgaaatcgagaaggcgcacccggacgtctacaacatgcttctg
cagatcatggaagaaggccggctgaccgactcgttcggtcggaaggtcgacttcaagaac
gtgatcctgatcatgacgacgaacgtcggggcgaagtcgatcgccagcagcccgttcggg
ttccggaccgtcgccaacgaggtccaggagcacgacaagatgaagacgaacgtcatggcg
gagatcagccgggtgttcaagcccgagttcatcggccgtctggacgagatcgtcgtcttc
cagaagctgaccgacgagaacatgcggcaggtcgtggacatcgagctgtcgaaggtccgc
aaccgtctcaaggagcggggcctgacgctgcgtctgtccgacgaggcgaagcagcttgtg
atcgacaagacgcacgccgatggcgagcgggacaatgtcgattacggggctcgtccgctc
cgccggtcgattgagatgtatgttgaggatccgctctcggaagaactgctccgcggcgtg
ttccaggggaagaacctgatcacggtgaaggtgcgggaagtcgggacggagaagcagttc
gactttgagggggcggtggacgactccctgggtgtggacgcggctccggagttggcgacg
gcgggtgcgtcgtcggacgagacggagtcgggctcgaactag
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