Planctomyces sp. SH-PL14: VT03_08760
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Entry
VT03_08760 CDS
T04354
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT03_08760 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pls03019
]
VT03_08760 (recQ_1)
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_08760 (recQ_1)
Enzymes [BR:
pls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VT03_08760 (recQ_1)
Messenger RNA biogenesis [BR:
pls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VT03_08760 (recQ_1)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VT03_08760 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
HTH_40
RecQ_Zn_bind
ResIII
HTH_23
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AMV17966
UniProt:
A0A142WTK6
LinkDB
All DBs
Position
complement(2214075..2216345)
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AA seq
756 aa
AA seq
DB search
MAATHLKEDEQTRTLREVLQRDWGYTEFRPLQREAMLACLRQRDSLVVMPTGGGKSICYQ
APALCVPGTAIVVSPLISLMKDQVDAACTSGIAAALLNSSLTGPEKTQVMRRLRAGELKL
LYVAPERLMAPQFLETIADVPISFFAIDEAHCVSQWGHDFRPHYRMLSELRDRFPDVAVH
AFTATATDRVRGDICDQLQLRDPEVLVGSFDRPNLQYRVERKDRLLGQIQRFIDRHPGES
GVIYCVTRKEVERVAAALASLNYSVAPYHAGMDDGARQKSQEDFIQDRVSIIVATVAFGM
GIDKSNVRYVIHAGMPQSIEHYQQESGRAGRDGLEAECCLFWGGDDLMTWKRIHEAQPPD
LRQASLDALKRVQTYCEGTFCRHRALVRFFGQELEEDCGKNCDICQAELQPVTEPLVLGQ
KILSSVHRQEQRFGPEYTAKVLVGARGKRILENGHDRLSTFGLLRSEPKEAVVSWIAQLV
EQGFLLKEGEFDVLRITAEGRRLLKGEVIPRLVVGNLASDNDDPEPSAGRERRRSPATSP
ESWAGVDRDLFERLREVRARFAAERSVPAFTIFSDSALRDMARQRPSSVDRFLLVSGVGR
KKQEDFGAAFVSEIVGYCSETGVGVDVSDEPTPLRPASRVDSESGSARKAPTSNALQAFP
FFDQRLPLAEIASKLGRVQSTVLDYLEQYLAFKNSSDLSPWVDEADVVRVRGAIEVVGLA
RLKPIFLHLEEQVSYNVIRVVIAAERARLGETADSQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacacacctgaaggaggacgagcagacacggaccctcagagaagtcctccaa
cgcgactgggggtacaccgaattccgccccctccagcgggaggcgatgctcgcctgcctc
cggcaacgggactccctcgtcgtcatgccgaccggcggcggaaagtcgatttgctaccag
gctcccgccctctgcgtcccgggaacggcgatcgtcgtctcccccctgatctccctgatg
aaggaccaggtcgacgccgcctgcacgtccggcatcgccgccgctctcctcaacagctcg
ctcaccgggcccgagaagacccaggtcatgcgccggctccgcgccggcgaactcaaactg
ctctacgtcgctccagagcggctcatggcgccgcagttcctcgagaccatcgcggacgtg
ccgatctcgttcttcgccatcgacgaagcgcactgcgtcagccagtggggccacgacttt
cgcccgcactaccgcatgctgtccgagctccgggaccgattccccgacgtcgcggttcat
gccttcaccgccaccgcgaccgatcgcgtccggggcgacatctgcgaccagcttcagctt
cgcgatcccgaagtcctcgtcgggagcttcgaccgacccaatcttcagtaccgtgtcgag
cggaaggaccgcctcctcggccagattcagcggttcatcgaccggcatccgggtgagagc
ggcgtcatctattgcgtgactcgcaaggaggtcgaacgggtggcggcggcgttggcgagc
ctcaactactccgtcgcgccgtatcacgcggggatggacgacggggcgcggcagaagagc
caggaggatttcatccaggaccgcgtctcgatcatcgtggcgaccgtcgccttcgggatg
gggatcgacaagtcgaacgtccgctacgtcatccacgccgggatgccgcagtcgatcgag
cactaccagcaggagagcggccgcgcggggcgcgacgggctggaggcggagtgctgcctc
ttctgggggggcgacgacctcatgacctggaagcggatccacgaggcccagcctcccgat
ctgcggcaggcgtcgctcgatgccctcaagcgcgtccagacctactgcgaggggaccttc
tgccggcaccgcgcgctggtccgtttcttcgggcaggagctggaggaggactgcgggaag
aactgcgacatctgtcaggccgagcttcagcccgtgaccgaaccgctggttctggggcag
aagatcctctcgtcggtccatcgccaggagcagcggttcgggcccgagtacacggcgaag
gttctcgtcggcgcgcgcgggaagcggatcctggagaacggacacgaccggctctcgacg
ttcggcctgctgcggtcggagccgaaggaagccgttgtgtcatggatcgcccaactcgtc
gagcaggggttcctcctcaaggaaggggaattcgacgttctgaggatcacggcggaagga
cgccggctcctgaagggggaggtcatcccgcgtcttgtcgtcgggaacctcgcttccgac
aatgacgatccggagcccagcgcgggacgggagcgccgccggtcgccggcgacctctccc
gagtcgtgggcgggggtcgatcgggacctctttgaacggctgcgggaggttcgggcccga
ttcgcggcggagcgaagcgtgccggccttcacgatcttctcggactccgcgctccgcgat
atggcccggcagcggccctcctccgtcgaccggttcctgctcgtgagcggtgtcggtcgg
aagaagcaggaggatttcggggccgccttcgtctccgagatcgtgggctattgcagcgag
accggcgtgggggtggacgtcagcgacgagccgacgccgcttcggcccgcttcgcgggtg
gactcggagagcggttccgcgagaaaggctccgacgtcgaacgcgcttcaggcgttcccg
tttttcgatcagcggctgccgctggcggagatcgcgtcgaaactggggcgcgtccagtcg
acggtgctggactatctggagcagtacctggcgttcaagaactcgtctgacctgagcccg
tgggtggacgaggccgacgttgtccgcgtgcggggggcgatcgaagtcgtcggcctggcg
cggctcaagccgatctttctgcacctcgaagagcaggtcagctacaacgtcattcgggtg
gtcatcgcggccgagcgggcgcggctgggagagacggccgactcgcagtga
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