Planctomyces sp. SH-PL14: VT03_11250
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Entry
VT03_11250 CDS
T04354
Symbol
gmr_2
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
Organism
pls
Planctomyces sp. SH-PL14
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
PAS
PAS_9
PAS_8
HAMP
Motif
Other DBs
NCBI-ProteinID:
AMV18459
LinkDB
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Position
complement(2848445..2851828)
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AA seq
1127 aa
AA seq
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MMPLGTRMPWNAFPLARARLGIRATVVLPLVCGTLAIAMLGLHWIGESEKSQRERHLQTQ
AWTLGRTLADVASADANRVLLTRLAASYVAEPGVQSVVIANGKPPAVPLTVAIANQSVWT
GRSFSEIPELADSADAAARAAETGQAEFRRIPGTIETVELLLPFVRPFAEGPSTPGLVAI
RIDGSLLKAAHDIRTRRLGLALLGAIGLLSTGVYLLIRQSVLRPVEAMSRFADEIALGNR
DARLKVGRHDELGRLARQIDSLFREVLRREERERAARAESQAARQRTESTLAELGSLKYA
LDQHAIISVIDQYGYFTHTNNKFCQQSGYRREQLAGMTHRLLDAGPDADAQWDGIWRTLA
EGNWHGEMCCRAADGSLYWVDNTIVPFRDGEGRVSQYVVMGTDITPRKRAELEMANERAL
LLAFVEHAPAAIAMFDRDMRYLAVSERWITDYGLEGREIIGRTHYEVFPELPGRWREVHQ
RCLAGETVTNPLDIWRPDDADCDQILHWEVRPWRHGDGSIAGLMMFTEDLTQQKQTEAAL
RETKEQFELALSGSNDGIWDWSVLSGNVFYSRRFKELLGYAEDEFAHRFESFDEHVHPED
RQEVMDKLQRHLEEGDQFDAVCRLRTKPGPFRWFRFRGEAVRNDQGRARRMAGSLSDITS
LKETEERLRESARIDQLTKLPNRALFLDRLSQQMQRSVRTGHFGYAVMFLDFDRFKIVND
SLGHDAGDELLVQIAARLREQIRGVDSVSCHLDESTTARLGGDEFVVLLTELRTPDDARV
VADRLMGALARPYVIGEHEVYSTASIGIVVGSPRYDRPEDVVRDADTAMYEAKRNGKSRY
VLFDASMHERVRRRMRLESDLHRAIAENQLFLVFQPIYDLRTRSLESVEALVRWKHPDQG
LISPGEFIPVAEESSLILMIGEWVFREACRRFAEWRKMLGPWAPPSISINVSRKQFSQRE
LPNVVASALQTYGIEPSQIHIEVTEDFFAGDIKSAVRAMNAIKALGLKLSIDDFGTGCSS
FASLHQFPVDTLKIDQSLIGEISRSEDAVAMIQGLTTIARSMEIKVVAEGVETAEQAAKL
LELGCDYAQGFYFARPLTNENLIALRLKEVPVDAALPEAGVSSSVPS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
gtgatgccgctcggaacccgaatgccctggaacgcctttcctctcgctcgcgctcggctc
ggcatccgggcgacggtcgtgctgccgctcgtgtgcggcacgctggccatcgcgatgctc
ggcctgcactggatcggggagagcgaaaagagccagcgggagcggcatctgcagacgcag
gcctggaccctcggccggacgctggccgacgtcgcgtccgccgacgccaaccgcgtgctg
ctgacgcggctcgccgcctcctatgtggcggagccgggcgtgcagtccgtcgtgatcgcg
aacggcaaacctcccgccgttcccctgaccgtcgcgatcgccaaccaatcggtctggacc
ggccggtcgttctccgagatccccgagctcgcggactcggcggatgcggcggcccgggcg
gcggagacggggcaggcggagttccgccggattcctggaacaatcgagacggtcgagctg
cttctccccttcgtccgccccttcgcggagggaccgtcgacgccggggctggtcgcgatc
cgcatcgacggcagcctgctcaaggcggcccatgacatccggacgcggcggctggggctg
gcactcctgggggcgatcggtctcctttcgaccggggtctacctcctcatccgccagtcg
gtcctgcgtcccgtggaagcgatgtcccgcttcgcggacgagatcgcgctcggcaaccgc
gacgcgcgactgaaggtagggcggcacgatgaactcggccggctggcgcgccagatcgat
tcgctgtttcgcgaagtcctccgccgcgaggagcgggaacgggcggcgcgggccgagtcc
caggcggcgcggcagcggacggaatcgacgctggcggagctcggctcgctgaagtacgcc
ctcgaccagcatgcgatcatctccgtcatcgaccagtacggctacttcacgcatacgaac
aacaagttctgccagcagagcgggtatcgccgggagcagctcgcgggcatgacccatcgc
ctcctcgacgccgggccggacgcggacgcccagtgggacgggatctggcggaccctcgct
gaggggaactggcatggagagatgtgctgccgcgcggcggacggcagcctgtactgggtc
gacaacacgatcgtccccttccgggacggcgaggggcgcgtctcccagtacgtcgtgatg
gggaccgacatcaccccccgcaagcgggccgagctggagatggccaacgaacgggccctc
ctgctggcctttgtcgagcatgcgccggcggccatcgccatgttcgaccgggacatgcgg
tacctggcggtcagcgagcggtggatcaccgactacggcctcgaaggccgggagatcatc
ggccggacgcactacgaagtcttcccggagctgccgggacgctggcgggaggtgcaccag
cgatgccttgccggggagacggtcaccaacccgctcgacatctggcggccggacgacgcg
gactgcgaccagatcctgcactgggaagtccgtccgtggcggcatggcgacggttcgatc
gccggcttgatgatgttcaccgaggacctgacccagcagaagcagaccgaggcggccctg
cgggagaccaaggagcagttcgagctggccctcagcggctcgaacgacgggatctgggac
tggagcgtcctgtccgggaacgttttctactcgcggcggttcaaggagctgctggggtac
gcggaagacgaattcgctcatcgcttcgagtcattcgatgagcacgttcaccccgaggac
cgccaggaggtgatggacaagctccagcggcacctggaggaaggggatcagttcgacgcg
gtctgccggctccggacgaagcctggcccgtttcgctggttccggttccgcggcgaggcg
gtgcggaacgatcagggacgggcccggcggatggccggctctctttccgacatcacttcg
ctcaaggagaccgaggaacggctgcgggaatcggcccgcatcgaccagctcacgaagctc
cccaaccgggcgctgttcctcgaccggctgtcccagcagatgcagcggtcggtccggacg
gggcacttcggctatgccgtcatgttcctggacttcgaccgcttcaagatcgtcaacgac
agcctggggcatgacgcgggggacgagctcctggtccagattgcggcgcggctgcgggag
cagatccgcggcgtcgattccgtgagctgccatctcgacgagtcgacgaccgcccggctg
ggaggggacgagttcgtcgtcctgctgaccgaactccgcaccccggacgacgcccgggtc
gtggcggaccggctgatgggagccctggcccggccgtacgtgatcggcgagcacgaggtc
tactccacggcgagcatcgggatcgtggtcggctcgccccgctacgaccgccccgaggac
gtcgtccgcgacgccgacaccgccatgtacgaggcgaagcggaacggcaagtcgcgatac
gtcctgttcgacgcgtcgatgcacgagcgggtccggcggcggatgaggctggagtcggac
ctgcaccgcgcgatcgcggagaaccagctgttcctggtattccagccgatctacgacctc
cgcacccggtcgctggagtcggtggaggccctcgttcgctggaagcatcccgatcagggg
ctgatctcgccgggggagttcattccggtcgccgaggaatcgtcgctgatcctgatgatc
ggcgagtgggtcttccgcgaggcgtgccgacggtttgccgaatggcggaagatgctgggg
ccgtgggctccgccgtcgatcagcatcaatgtctcgcggaagcagttttcgcagcgggag
ctgccgaacgtcgttgcgtccgcgctgcagacgtacggtatcgagccgtcgcagatccat
attgaggtgacggaggacttctttgcgggggacatcaagtcggccgtgcgggcgatgaac
gcgatcaaggcgctcggcctcaagctgtcgatcgacgattttgggacgggttgctcgtcg
ttcgcctctctgcaccaattcccggtcgacacgctcaagatcgaccagtcgctgatcggg
gagatctcccgctccgaggacgccgtggcgatgatccaggggctgacgacgattgcccgg
agcatggagatcaaggtggtggcggaaggggtcgagacggccgagcaggcggccaagctg
cttgagctggggtgcgattatgcccagggcttttattttgcccggccgctgacgaatgag
aatctgattgcgctgcgactcaaagaggtcccggtggatgcggcactccccgaggcggga
gtctcgtcatccgtgccgtcataa
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