Planctomyces sp. SH-PL14: VT03_15225
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Entry
VT03_15225 CDS
T04354
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT03_15225 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pls03019
]
VT03_15225 (recQ_2)
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_15225 (recQ_2)
Enzymes [BR:
pls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VT03_15225 (recQ_2)
Messenger RNA biogenesis [BR:
pls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VT03_15225 (recQ_2)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VT03_15225 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMV19241
UniProt:
A0A142WX56
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All DBs
Position
complement(3881911..3883344)
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AA seq
477 aa
AA seq
DB search
MTHQRLLRLLAEQFGFSDFRSGQAAAIQSALNGRDVVVVMPTGSGKSLCFQLPAIELEGT
TVVVSPLIALMKDQTEKLNARGLHAVSVNSSLGEKQLKAALQAIENGEVEFIYTTPERLQ
EPQFLSLLQRLSIDLFVVDEAHCISTWGQDFRPAYMELGAALKAIGRPPVLALTASATET
VLGDIIRELGIPEAQVIETGYRRDNLFLEVKHFQTPTDKERAMHELAKRDGQGIVYVATT
RAVDDLKAGLIAQGVSSVGYHGRMSARDRNSAQDVFMSGQAQVVVATNAFGLGIDKPDIR
WITHFHVPTTLEAYYQEIGRSGRDGQPAACTLLYCPSDWKLLRFFRGNRFPDDSDLVNVY
HAVQTACRNRGNPTTASLEAASPISKAKTRLCLKLLENAGVLRRRSSHWQLIVSDLSRER
CEAIACAFVRKEEADRRCQEEMQAFAEGKRCRWRSIVEYFERSASSGDCGHCDRCGG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcagcggttgctcagactgcttgctgagcaatttggattcagcgactttcga
tcaggccaggcggccgcgattcaatcggctctcaacggccgcgacgtcgtcgtcgtgatg
ccgaccggatcgggaaagtccttgtgcttccaactcccggcgattgaactcgaagggacg
actgtcgtcgtgagtccgctgatcgctttgatgaaagatcaaacggagaagctcaacgcc
cgggggctgcacgcagtctccgtcaatagctccctcggtgagaagcagctcaaagcagcg
cttcaagcgatcgagaacggtgaagtcgagttcatctacacgacgcccgaacgattgcag
gagccccaattcctcagcctgctgcagcgattgtcgattgaccttttcgtggttgacgaa
gcccattgcatcagcacatggggacaggacttccgacctgcctacatggaacttggagcc
gcactcaaagcgatcggacgaccgcctgtactggcactgacggccagtgccactgagacg
gtactcggcgacatcatccgggaattgggaattcccgaagctcaagtcatcgaaacaggc
taccgacgtgacaacctcttcctggaggtcaaacactttcagacgccgactgacaaggag
cgcgcgatgcacgaactagccaaacgggatggccaagggattgtgtatgttgcgacaacc
cgtgcggtcgacgatctgaaggcagggcttattgctcagggagtctcttcagtagggtac
cacggtcgaatgtcggcccgggatcggaattccgcacaggacgtgttcatgagcggccag
gcccaggttgtggtggccaccaacgcatttgggcttggcatcgacaagccggacattcgc
tggattacgcacttccatgttccgacgactctggaggcatactatcaggagattggccgc
tccggacgtgacgggcaacctgcggcctgtacgcttctttactgcccgtctgattggaag
ctcctacggttctttcgaggcaaccgtttccccgacgactcggatctcgtgaacgtctat
cacgccgtgcagaccgcttgtcgcaatagaggtaacccgacaactgccagtcttgaggct
gcctccccgatctccaaggcaaagacgcggctttgcctgaagctgctggaaaatgcaggc
gtcctgcgccgccggtcgtcccactggcagctcattgtctccgatctctcccgagaacga
tgcgaggcgatcgcctgtgccttcgttcggaaagaggaggccgaccgaagatgtcaggaa
gagatgcaagcgtttgccgaggggaagcgctgccgctggcgttcgatcgtggagtatttc
gaacggtccgctagttccggtgattgcggtcactgtgatcgatgtggagggtag
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