Planctomyces sp. SH-PL14: VT03_15580
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Entry
VT03_15580 CDS
T04354
Symbol
zraR_2
Name
(GenBank) Transcriptional regulatory protein ZraR
KO
K02584
Nif-specific regulatory protein
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VT03_15580 (zraR_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pls03000
]
VT03_15580 (zraR_2)
Transcription factors [BR:
pls03000
]
Prokaryotic type
Helix-turn-helix
Other families
VT03_15580 (zraR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
FHA
Yop-YscD_cpl
GAF
GAF_2
GAF_3
AAA_2
AAA_5
AAA
AAA_16
Mg_chelatase
HTH_29
MCM
HTH_23
FHA_2
HTH_30
HTH_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMV19312
UniProt:
A0A142WXW4
LinkDB
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Position
complement(3983778..3985880)
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AA seq
700 aa
AA seq
DB search
MDCPPTRSDQAQDVAYLVVHRGAARVEVVPLTLGGRLTVGRAPSNRIVITDKKCSRVHCE
FFSLNDSWYVRDMASRNGIAVDGVAATGDVELRFGHSVAVGDTTLLFTNTDPTTDGQDGR
ADRVAIIERRSGTQYDFPSGIERRGQVRLDAAELFQIGRAMHEAGDIASLCSIVLDRLMT
ALPAGVGAILLLPPELPAVTRNLSLVTAHSRSGDAPCAYSEYLSGLVLKEKDAVLAHDIA
QHEFLSGRESIERLQADSAVCAPIRISADADAEVLGVIHLYSTDHAAPLTAEHLEFTLAV
ADQMAGLLVTLRERETLERNLSLEQSRGKAYRDQLEIETELVGTSPKLSRVKSAIGRVAP
TDATVLIRGESGVGKELVARALHFNSHRKGGPFVCVNCAALTETLLESELFGHEKGSFTG
ASAQKAGKFEQADEGTIFLDEIGEMSQEIQAKFLRVLEGQSFERVGGDKEISVDVRVVTA
TNRNLEEAVRHGKFRSDLFFRLQVIEIDVPPLREHPEDIAELAGHFVERFTTKSRSRVKG
LGRLAIEKLMKHSWPGNVRELRNVIERAVILSDREILTPDDLVLTRLDLSPPAVPPSSPT
PPNSSLSPETDPLTEIAESDPTETCYDPQINLWGSFVQQGLTMDDIERLYMEAVLKHCDW
NKSQASRILGIERTTLDRRLKRYRMSRPGGGPEDDGEDTN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggattgtccgccgacgcggtcagatcaggcccaggatgtggcctatcttgtcgtgcat
cgaggggctgcacgtgtcgaggttgtaccgctcaccctcggcggacggctgacggtgggg
cgcgccccctccaatcgcattgtcatcaccgacaagaagtgcagccgggtccactgtgag
ttcttcagcctgaatgactcgtggtacgtgcgggacatggcgagccgtaacggcatcgcc
gttgatggcgtcgccgccaccggcgacgtggagctccgcttcggccactccgtggcggtc
ggcgacaccacgctcctctttacgaatacggacccgaccaccgacggtcaggacggtcgc
gccgaccgggtggcgatcatcgagcgccgcagcggcacgcagtacgacttcccctcgggg
atcgagcggcgcggccaggtgcggctcgacgcggccgaactgttccagatcggccgggcg
atgcacgaggcgggcgacatcgccagcctgtgcagcatcgtcctcgaccggctgatgaca
gcactgcccgccggcgtcggcgccatcctgctgcttccaccggaactcccggccgtcacg
cgaaacctctcgctcgtcaccgcgcactcccggtccggggacgcgccgtgcgcctactcg
gaatacctttcgggactcgtcctcaaagagaaggacgccgtcctcgcccacgatatcgcc
cagcacgagttcctgagcggccgcgagagcatcgagcggcttcaggcggacagcgccgtg
tgcgcaccgatccggatttcggcggacgcggatgccgaagtcctgggggtcatccatctt
tactccaccgaccacgccgctcccctgacggcagagcacctcgagttcacgcttgcggtc
gccgatcagatggcgggactcctggtgacgctccgtgagcgggagacgctcgagcggaat
ctttcgctcgaacaaagccggggcaaggcttaccgggaccagctggagatcgaaacggag
ctggtcggaaccagccctaagctctcccgcgtgaagagcgccatcggacgcgttgcgccg
accgacgccaccgtcctgatccgcggcgagagcggcgtcggcaaggaactcgtcgcccgc
gccctgcacttcaacagccatcgcaaggggggcccgttcgtctgcgtgaactgcgccgcc
ctgacggaaacgctcctcgagagcgaactgttcggacacgagaagggctcgttcaccggc
gcctccgcacagaaggccggcaagttcgagcaggcggacgaagggacgatcttcctcgac
gagatcggggagatgagccaggagatccaggccaagttcctgcgggtcctcgaaggccag
agcttcgagcgcgtcggcggggacaaggagatcagcgtcgacgtccgcgtcgtcaccgcc
accaaccgcaatctggaagaggcggtccgccacggcaagttccgcagcgacctcttcttc
cgcctgcaggtcatcgagatcgacgtccccccgctgcgggaacatccggaagacatcgcc
gagctcgccggacacttcgtcgagcggttcaccaccaagtcccgcagccgcgtcaaaggc
ctgggccggctggcgatcgaaaaactgatgaagcactcgtggcccggcaacgtccgcgaa
ctgcgaaacgtgatcgaacgggcggtgatcctcagtgatcgcgagatcctgacgccggat
gacctcgtcctgacccgcctcgacctctcaccccccgccgtcccgccgtcctccccgacc
ccaccgaactcttccctttccccggagaccgatccgttgaccgagattgctgaatcggac
ccgaccgagacctgctacgacccgcagatcaacctgtggggcagctttgtgcaacaggga
ctgacgatggacgacatcgaacgtctctacatggaggcggtgctgaagcactgcgactgg
aacaagtcccaggcgagccggatcctcgggattgagcggaccacgctcgaccgccgcctg
aagcgctaccgcatgagtcgtcccgggggcggcccggaagacgacggcgaagacacgaac
tga
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