KEGG   Planctomyces sp. SH-PL14: VT03_16690
Entry
VT03_16690        CDS       T04354                                 
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pls  Planctomyces sp. SH-PL14
Pathway
pls00010  Glycolysis / Gluconeogenesis
pls00020  Citrate cycle (TCA cycle)
pls00260  Glycine, serine and threonine metabolism
pls00280  Valine, leucine and isoleucine degradation
pls00310  Lysine degradation
pls00380  Tryptophan metabolism
pls00620  Pyruvate metabolism
pls00630  Glyoxylate and dicarboxylate metabolism
pls00640  Propanoate metabolism
pls00670  One carbon pool by folate
pls00785  Lipoic acid metabolism
pls01100  Metabolic pathways
pls01110  Biosynthesis of secondary metabolites
pls01120  Microbial metabolism in diverse environments
pls01200  Carbon metabolism
pls01210  2-Oxocarboxylic acid metabolism
pls01240  Biosynthesis of cofactors
Module
pls_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pls_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pls_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pls_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pls00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    VT03_16690 (lpdA)
   00020 Citrate cycle (TCA cycle)
    VT03_16690 (lpdA)
   00620 Pyruvate metabolism
    VT03_16690 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    VT03_16690 (lpdA)
   00640 Propanoate metabolism
    VT03_16690 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VT03_16690 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    VT03_16690 (lpdA)
   00310 Lysine degradation
    VT03_16690 (lpdA)
   00380 Tryptophan metabolism
    VT03_16690 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    VT03_16690 (lpdA)
   00670 One carbon pool by folate
    VT03_16690 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pls04147]
    VT03_16690 (lpdA)
Enzymes [BR:pls01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     VT03_16690 (lpdA)
Exosome [BR:pls04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   VT03_16690 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox NAD_binding_8 FAD_oxidored GIDA UDPG_MGDP_dh_N FAD_binding_2 Pyr_redox_3 DUF478 AlaDh_PNT_C HI0933_like 3HCDH_N FAD_binding_3 Lys_Orn_oxgnase DAO Thi4
Other DBs
NCBI-ProteinID: AMV19534
UniProt: A0A142WY79
LinkDB
Position
complement(4290037..4291461)
AA seq 474 aa
MPAAPTHAQLVVLGGGPGGYPAAFEAADHGMDVVMVDQDAQPGGVCLNRGCIPSKALLHV
AKLIHEAHESEAWGVTFQPPKIDLDKLRSFKSDVVTKLTGGIRQLSGARGVKLVQARGKF
VNNKTLELAHADGTTSQLTFDKCIVAVGSRPAMPKIFDIGDERVMDSTGALNLPEIPGTM
LVIGGGYIGLEMGSVYAALGTKITVVEALPTILAAADRDLVAPLQKRLAGQFAAIHVNTK
VKSLKASPEGIVAELEGEGITSPQTFNRVLVSVGRAPNGKGIGLESTKVVVNDRGYIQVD
RNMRTAEPNILAIGDVAGEPMLAHKATREAKVAVETLLGEPAQFDNIAIPAVVFTDPELA
WCGITEAEAKAAGKEVIVTKFPWAASGRAQTIGRTEGLTKLIIEPKTERILGVGIVGPGA
GELIAEGVLAVETAAVARDLAETIHAHPTLSETIMEAAESAFAQATHVFRPKRK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgccagccgctcccacccacgcccaactcgtcgttctcggcgggggccccggcggctat
ccggcagccttcgaagccgccgaccacggcatggacgtcgtcatggtcgaccaggacgcc
caacccggcggcgtctgcctcaaccgcggctgcatcccctccaaagccctcctccacgtc
gccaaactcatccacgaggcgcacgaatccgaagcctggggcgtcacgttccagcccccc
aagatcgacctcgacaagctccgcagcttcaagtctgacgtcgtcaccaagctcaccggc
ggcatccgccaactctccggcgcccgcggcgtcaaactcgtccaggcccgcggcaagttc
gtcaacaacaagaccctcgaactcgcccatgccgacggcaccaccagtcagctcaccttc
gacaagtgcatcgtcgccgtcggctcccgccccgccatgccgaagatcttcgacatcgga
gacgaacgggtcatggactcgaccggcgccctgaacctccccgagatcccggggacgatg
ctcgtcatcggcgggggctacatcggcctcgaaatgggctcggtctacgccgccctcggg
accaagatcaccgtcgtcgaagccctcccgacgatcctcgccgccgccgaccgcgacctc
gtcgcgccgctccagaagcggctcgccggccagttcgccgccatccacgtcaacacgaag
gtcaagagcctcaaggcctcgccggaagggatcgtggctgagctggaaggggaagggatc
acctcgccgcagacgttcaatcgcgtcctcgtctcggtcggccgggcgccgaacgggaag
gggatcggcctggagtcgacgaaggttgtcgtgaacgaccgcggctacattcaggtcgac
cggaacatgcggacggcagagccgaacatcctcgctatcggggacgtcgccggagagccg
atgctggctcataaggcgacacgggaagccaaggtcgctgtcgagacgctgctgggtgag
ccggcgcagtttgacaacatcgcgattcccgccgtcgtcttcaccgatcccgaactcgcg
tggtgcgggatcacagaagcggaagcgaaggcggcggggaaggaagtgattgttacgaag
ttcccttgggcggcttcggggcgggctcagacgattggtcggacggaggggttgacgaag
ctcattattgagccgaagacggagcggatcctgggagtcggcattgtcggtcccggtgcg
ggtgagctgatcgccgaaggggtcctggccgtcgagacggcggcggtcgcccgcgatctc
gcggagacgatccatgcgcacccgacgctgtcggagacgatcatggaggcggcggaatcg
gcgtttgctcaggcgacgcacgtgttccgtcccaagcgtaagtag

DBGET integrated database retrieval system