Planctomyces sp. SH-PL14: VT03_16690
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Entry
VT03_16690 CDS
T04354
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00010
Glycolysis / Gluconeogenesis
pls00020
Citrate cycle (TCA cycle)
pls00260
Glycine, serine and threonine metabolism
pls00280
Valine, leucine and isoleucine degradation
pls00310
Lysine degradation
pls00380
Tryptophan metabolism
pls00620
Pyruvate metabolism
pls00630
Glyoxylate and dicarboxylate metabolism
pls00640
Propanoate metabolism
pls00670
One carbon pool by folate
pls00785
Lipoic acid metabolism
pls01100
Metabolic pathways
pls01110
Biosynthesis of secondary metabolites
pls01120
Microbial metabolism in diverse environments
pls01200
Carbon metabolism
pls01210
2-Oxocarboxylic acid metabolism
pls01240
Biosynthesis of cofactors
Module
pls_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pls_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pls_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pls_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VT03_16690 (lpdA)
00020 Citrate cycle (TCA cycle)
VT03_16690 (lpdA)
00620 Pyruvate metabolism
VT03_16690 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
VT03_16690 (lpdA)
00640 Propanoate metabolism
VT03_16690 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VT03_16690 (lpdA)
00280 Valine, leucine and isoleucine degradation
VT03_16690 (lpdA)
00310 Lysine degradation
VT03_16690 (lpdA)
00380 Tryptophan metabolism
VT03_16690 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VT03_16690 (lpdA)
00670 One carbon pool by folate
VT03_16690 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pls04147
]
VT03_16690 (lpdA)
Enzymes [BR:
pls01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VT03_16690 (lpdA)
Exosome [BR:
pls04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VT03_16690 (lpdA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
NAD_binding_8
FAD_oxidored
GIDA
UDPG_MGDP_dh_N
FAD_binding_2
Pyr_redox_3
DUF478
AlaDh_PNT_C
HI0933_like
3HCDH_N
FAD_binding_3
Lys_Orn_oxgnase
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AMV19534
UniProt:
A0A142WY79
LinkDB
All DBs
Position
complement(4290037..4291461)
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AA seq
474 aa
AA seq
DB search
MPAAPTHAQLVVLGGGPGGYPAAFEAADHGMDVVMVDQDAQPGGVCLNRGCIPSKALLHV
AKLIHEAHESEAWGVTFQPPKIDLDKLRSFKSDVVTKLTGGIRQLSGARGVKLVQARGKF
VNNKTLELAHADGTTSQLTFDKCIVAVGSRPAMPKIFDIGDERVMDSTGALNLPEIPGTM
LVIGGGYIGLEMGSVYAALGTKITVVEALPTILAAADRDLVAPLQKRLAGQFAAIHVNTK
VKSLKASPEGIVAELEGEGITSPQTFNRVLVSVGRAPNGKGIGLESTKVVVNDRGYIQVD
RNMRTAEPNILAIGDVAGEPMLAHKATREAKVAVETLLGEPAQFDNIAIPAVVFTDPELA
WCGITEAEAKAAGKEVIVTKFPWAASGRAQTIGRTEGLTKLIIEPKTERILGVGIVGPGA
GELIAEGVLAVETAAVARDLAETIHAHPTLSETIMEAAESAFAQATHVFRPKRK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgctcccacccacgcccaactcgtcgttctcggcgggggccccggcggctat
ccggcagccttcgaagccgccgaccacggcatggacgtcgtcatggtcgaccaggacgcc
caacccggcggcgtctgcctcaaccgcggctgcatcccctccaaagccctcctccacgtc
gccaaactcatccacgaggcgcacgaatccgaagcctggggcgtcacgttccagcccccc
aagatcgacctcgacaagctccgcagcttcaagtctgacgtcgtcaccaagctcaccggc
ggcatccgccaactctccggcgcccgcggcgtcaaactcgtccaggcccgcggcaagttc
gtcaacaacaagaccctcgaactcgcccatgccgacggcaccaccagtcagctcaccttc
gacaagtgcatcgtcgccgtcggctcccgccccgccatgccgaagatcttcgacatcgga
gacgaacgggtcatggactcgaccggcgccctgaacctccccgagatcccggggacgatg
ctcgtcatcggcgggggctacatcggcctcgaaatgggctcggtctacgccgccctcggg
accaagatcaccgtcgtcgaagccctcccgacgatcctcgccgccgccgaccgcgacctc
gtcgcgccgctccagaagcggctcgccggccagttcgccgccatccacgtcaacacgaag
gtcaagagcctcaaggcctcgccggaagggatcgtggctgagctggaaggggaagggatc
acctcgccgcagacgttcaatcgcgtcctcgtctcggtcggccgggcgccgaacgggaag
gggatcggcctggagtcgacgaaggttgtcgtgaacgaccgcggctacattcaggtcgac
cggaacatgcggacggcagagccgaacatcctcgctatcggggacgtcgccggagagccg
atgctggctcataaggcgacacgggaagccaaggtcgctgtcgagacgctgctgggtgag
ccggcgcagtttgacaacatcgcgattcccgccgtcgtcttcaccgatcccgaactcgcg
tggtgcgggatcacagaagcggaagcgaaggcggcggggaaggaagtgattgttacgaag
ttcccttgggcggcttcggggcgggctcagacgattggtcggacggaggggttgacgaag
ctcattattgagccgaagacggagcggatcctgggagtcggcattgtcggtcccggtgcg
ggtgagctgatcgccgaaggggtcctggccgtcgagacggcggcggtcgcccgcgatctc
gcggagacgatccatgcgcacccgacgctgtcggagacgatcatggaggcggcggaatcg
gcgtttgctcaggcgacgcacgtgttccgtcccaagcgtaagtag
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