Planctomyces sp. SH-PL14: VT03_17760
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Entry
VT03_17760 CDS
T04354
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03030
DNA replication
pls03430
Mismatch repair
pls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VT03_17760
03430 Mismatch repair
VT03_17760
03440 Homologous recombination
VT03_17760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pls03032
]
VT03_17760
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_17760
Enzymes [BR:
pls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VT03_17760
DNA replication proteins [BR:
pls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VT03_17760
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VT03_17760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
THBD
Motif
Other DBs
NCBI-ProteinID:
AMV19748
LinkDB
All DBs
Position
complement(4541315..4542337)
Genome browser
AA seq
340 aa
AA seq
DB search
MPALHATAFLAKTPAKLGPVIVLHGDEAHLKNSAISRLAQALLGPDADASMGLVPFDGKQ
CDFKMVKGELQTVSMFGSARVIVVHGADDFVTEHRPALEAYCDKPSSRSTLVLELKTWRA
NTKLAKKIAEMGLELDCSQLEGNALAKWLAEQAESQYGKQLTRDAAALLPELAGTSLTLL
AQELAKLASFVGDGKRIGVDEVRQLVGGWKAETTWTMVNAIRDGKPGEALECIQKLLHAG
EAPQKILGGMNFVFRRIANATEKSRSMALPAALKEAGVYYKELELVERYLRRIGRDRAER
IIPRLVAADRGLKGASRVSDRLQIENLVLWLTGTVPVSQA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctccacgccaccgccttcctcgccaagacccccgccaaactcggcccggtc
atcgtcctccacggcgacgaagcccacctcaaaaacagcgccatctcccgtctcgcccaa
gccctcctcggccccgacgccgacgcctccatgggactcgtccccttcgacggcaaacag
tgcgacttcaagatggtcaaaggagaactccagaccgtctccatgttcggctccgcacgc
gtcatcgtcgtccacggcgcggatgacttcgtcaccgaacaccgccccgccctcgaagcc
tactgcgacaaaccctcctcccgctccaccctcgtcctcgaactcaagacctggcgagcc
aacaccaaactcgccaaaaagatcgccgagatgggcctcgagctcgactgctcccagctc
gaaggcaacgccctcgccaaatggctcgccgaacaggccgagtcccagtacggcaaacaa
ctcacccgcgacgccgccgccctcctcccggaactcgccggaaccagcctgaccctcctg
gcccaggaactcgccaaactcgcctcgttcgtcggcgacgggaaacggatcggcgtcgac
gaagtccgccagctcgtcggcggctggaaggccgaaaccacctggaccatggtcaacgcc
atccgcgacggcaaaccgggcgaagccctcgagtgcatccagaaacttctccacgccgga
gaagccccgcaaaagatcctcggcgggatgaactttgtcttccgccggatcgccaacgcc
accgagaagtcccgctccatggccctgccggccgccctcaaggaggcgggcgtctactac
aaggagctggagctggtggagcggtacctccgccgcatcggccgggaccgagccgaacgg
atcatcccccgcctcgtcgccgccgaccgcggactcaagggagcgagccgcgtctcggat
cggctgcagatcgagaacctcgtcctgtggctcaccggaacggtccccgtgagccaggcg
tga
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