Planctomyces sp. SH-PL14: VT03_17925
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Entry
VT03_17925 CDS
T04354
Symbol
smc_6
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pls03036
]
VT03_17925 (smc_6)
Chromosome and associated proteins [BR:
pls03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
VT03_17925 (smc_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SMC_hinge
AAA_21
AAA_15
AAA_29
DUF7006
Motif
Other DBs
NCBI-ProteinID:
AMV19781
UniProt:
A0A142WYT1
LinkDB
All DBs
Position
complement(4593215..4597093)
Genome browser
AA seq
1292 aa
AA seq
DB search
MLKSLELFGFKSFADRTLFEFSPGVTCVVGPNGSGKSNVVDGIKWILGDQSAKSLRGKEM
TDVIFNGSNSRKASAFAEASLSFDNASGRLPVDSAEVKIGRRLYRSGDSEYLLNGNVVRL
KDIRDMFMGTGAGTAAYSIIEQGRVDQILQANPATRRLVFEEAAGISKYKSRKIEAERKL
ERVAQNLLRLTDIVDEVETQLNSTRSQASKAAKYRELAVELKTLWTGLAADDFREHQSHM
AGIQADAAGAQAEVERLAGELSQIEEETQGLEGSLSEHERAVRELEKQAGANREQIAVQE
STIRHQTSRLKELEQEIDRLRQDRLTLTVRSARIDEELRTTSARLEQFARAFDEQRLAMQ
GREEELAGLRVLFDEARARIRETRNRRDELLKRVSEQQRKTAALESQLSAAAETVALAET
KVRESVDRLALAERELERQQIATGEIQSSSDAAREQIESIRLERMNLLGDHGQTERRLAD
LRERRSAAQARLTVLQDLERRQEGLGIGVREILERAATVASPPWSSIVGSVGELVDAALD
VAPLIEMALGSRTQLIVVDDAGPLIDYLNRGEAHILGRVGFLELPSARRGAPTAAAAARS
RGFRISAERLPDLSHEAGVIARADTLLTESEAVPGLAARLLADTWIVASLKDAYDLLDGV
GAGCRFVTQQGELVEADGTLYVGTVPSENAVLSRKSELRQLRNEIIRLDRTITSEVDRLG
WLTSSLTDHDGRLAAADQEFQLVSAQLAEAVTRLDSQQQTVARLTEELSSYEGVLSRQEE
RRDQVTRALDEQRVLMEEERANADALTLEVADAEQQTASIEATLNLLIETAREEQLEFAK
HEERLKTLQSDQVRLRQDQVQRVAQQKEVEQRLRSLLSGRREAIQLILRTESSVSLRFGQ
GETLSQSVRSAAKQRDAVRMQRQLLSRRGDELHKKRRAAQDRQHAAEMQIREREMHLRSL
AEKMQEEYQTTLEELAASGVSSFRAYLEEHAPEQAAQMWGTRESEEAAVEEAADEETGME
AVDASDEESVEVEVESNELAAEESEAGESAYAELVPVVNYADIRPELEAAVERLRRRIKA
LGSINTDALNDLDELESRFSILSAQLQDLQEAKSTLEEIIRRINTESKRLFLETFETIRG
HFRELFRKVFGGGEGDIVLENTDDVLECGLDIVARPPGKELRSLTLLSGGEKTMTAVALL
FAMFRSKPSPYCILDEVDAALDDANVGRYINVIREFAEMTQFVVITHRKQTMTAANVLYG
VTMEQAGVSKRMSVRFEEVGENGEIKKASKAA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtctctcgaacttttcggtttcaagagcttcgcggatcggactctctttgag
ttctctccgggggtgacgtgtgtcgttggaccgaacggaagcggcaagagcaacgtcgtc
gacggcatcaagtggatcctgggggaccagagcgccaagagccttcgcggaaaggagatg
acagacgtcatcttcaacggctccaacagccgtaaggcgagcgccttcgccgaggcgtcc
ctctccttcgacaacgcttccggccggctcccggtcgacagcgccgaagtgaagatcggc
cggcggctctaccgcagcggcgactcggagtacctgctcaacgggaacgtcgtccgcctc
aaagacatccgtgacatgttcatggggaccggggcggggaccgcggcctacagcatcatc
gagcaggggcgggtcgaccagatcctccaggccaacccggcgacgcggcggctcgtcttc
gaagaggcggccgggatcagcaagtacaagtcccggaagatcgaggcggagcggaagctg
gagcgggtcgcgcagaacctgttgcggctgaccgacatcgtcgacgaggtcgagacccag
ctcaattcgacccgcagccaggcgagcaaggcggccaagtaccgcgagctggcggtcgag
ctcaagaccctctggaccgggctggcggcggacgacttccgcgagcaccagtcccacatg
gccggcatccaggccgatgcggccggggcgcaggccgaggtcgagcggctggcgggcgag
ctgtcgcagatcgaagaggagacgcaggggctggaagggagcctctccgagcatgagcgg
gcggtccgcgagctggagaagcaggcgggagccaaccgcgagcagatcgccgtccaggaa
tcgacgatccggcaccagacctcgcggctgaaggaactggagcaggagatcgaccggctg
cggcaggatcgcctgacgctgacggtccgttcggcccggatcgacgaggagctgcggacc
acctccgcgcggctggagcagttcgcgcgggccttcgacgagcagcggctggcgatgcag
ggtcgcgaggaagagctcgccgggctgcgggtcctgttcgacgaggcgcgggcccggatc
cgcgagacccggaaccgccgggacgaactcctcaaacgggtcagcgagcagcagcggaag
accgcggccctcgaatcgcagctcagcgcggcggccgagaccgtggcgctcgccgaaacg
aaggtccgcgagagcgtcgaccggctggctctcgccgagcgggaactcgagcggcagcag
atcgcgacgggcgaaatccagtcgtcgagcgacgccgcccgcgaacagatcgagtcgatc
cgcctggagcggatgaatctcctcggcgaccacggccagaccgaacggcggctggcggac
ctgcgggagcgccgcagcgccgcgcaggcccggctgaccgtgttgcaggacctggagcgg
cgtcaggaagggctcgggatcggggtccgcgaaatcctcgaacgggccgccacggtcgct
tcgccgccgtggtcgagcatcgtcgggagcgtcggcgaactcgtcgacgcggcgctcgac
gtcgccccgctgatcgaaatggcgctcggctcacggacgcaactcatcgtcgttgacgac
gccggtccgctcatcgattacctcaaccgcggcgaggcccacatcctgggccgtgtcggg
ttcctggaactcccctccgcccgccgaggcgcgccgacggccgcggcggcggcccgatcc
cgcgggttccggatctccgcggagcggctgccggacctgtcgcacgaggcgggggtgatc
gcccgggccgacacgctcctgaccgaatccgaagcggttccgggactggcggcgcggctc
ctggccgatacctggatcgtcgcctcgctgaaagacgcgtacgacctcctcgacggtgtc
ggggcgggctgccggttcgtgacccagcagggggagctcgttgaagcggacgggacgctc
tatgtcgggacggtgccgagcgagaacgccgtcctctcccgcaagagcgagcttcgccag
ctccgcaacgaaatcatccgcctcgaccggacgatcacgagcgaagtcgaccggctgggc
tggctgacgtcttcgctgaccgaccacgacggccggctcgccgccgccgaccaggaattc
cagctggtctccgcgcagctcgccgaggcggtgacgcggctcgactcgcagcagcagacc
gtggcccggttgaccgaggaactgagcagctacgaaggagttctgagccgccaggaggag
cgccgcgaccaggtgacccgggccctcgacgagcagcgggtcctcatggaagaggaacgg
gcgaatgccgacgccctgacgctggaagtggcggatgccgagcagcagacggcgtcgatc
gaggcgacgctcaacctcctgatcgagacggcccgcgaggaacagctcgagttcgccaag
cacgaggaacggctcaagacactccagagcgatcaagtccggctgcggcaggatcaggtc
cagcgcgtggcgcagcagaaggaagtcgaacagcggctgcggtcgctcctgtccggacgg
cgggaggcgatccagctcatcctgcggaccgagtcgagcgtctcgctgcggttcggccag
ggggagacgctgtcgcagtcggtgcggagcgcggcgaagcagcgggatgcggtccggatg
cagcggcagctcctgtcccgccgcggggacgaactccacaagaagcggcgggcggctcag
gaccggcagcacgccgccgaaatgcagatccgcgagcgcgagatgcatctccgctcgctc
gccgagaagatgcaggaggagtaccagacgaccctcgaagagctggcggccagcggcgtc
tcgtccttccgcgcgtacctcgaagagcatgcgcccgagcaggcggcacagatgtggggc
acccgtgagtccgaagaggcggccgttgaagaggctgcggacgaagaaaccgggatggaa
gcagtcgacgcttcggacgaagagtccgtcgaagtcgaggtggagtcgaacgagctggcg
gcggaggagtcggaggccggggagtcggcctacgccgagctcgtcccggtggtgaactac
gccgacatccgtcccgagctggaggcggcggtcgagcggctgcgacggcggatcaaggcg
ctcgggagcatcaacaccgacgcgctgaacgatctcgacgagctggagtcgcggttctcg
atcctgagcgcccagcttcaggacctgcaggaagcgaagtcgacgctggaagagatcatt
cgccgtatcaatacggagagcaaacggctgttccttgagacgttcgagacgatccgcggg
cacttccgggaactgttccgcaaggtcttcggcggcggcgaaggggatatcgttctcgag
aacaccgacgacgtgctggagtgcggcctcgacatcgtggcccggccgccgggcaaggag
ctccgctcactgacgctgctcagcggtggcgagaagaccatgaccgccgtggcgctcctg
ttcgcgatgttccgcagcaagccgagcccgtactgcatcctggacgaagtcgacgccgcg
ctcgatgacgcgaacgtcggccggtacatcaacgtcattcgggagttcgccgagatgacg
cagtttgtcgtcattacgcaccggaagcagacgatgacggccgctaacgtcctctacggc
gtgacgatggagcaggcgggggtctcgaagcggatgtcggtccggttcgaggaagtgggc
gagaacggcgagatcaagaaggccagcaaggcggcttga
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