Planctomyces sp. SH-PL14: VT03_18725
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Entry
VT03_18725 CDS
T04354
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VT03_18725 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pls01007
]
VT03_18725 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pls03016
]
VT03_18725 (lysS)
Enzymes [BR:
pls01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VT03_18725 (lysS)
Amino acid related enzymes [BR:
pls01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VT03_18725 (lysS)
Transfer RNA biogenesis [BR:
pls03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VT03_18725 (lysS)
Prokaryotic type
Other AARSs
VT03_18725 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Pelota_N
DUF6434
Motif
Other DBs
NCBI-ProteinID:
AMV19939
LinkDB
All DBs
Position
complement(4845196..4846734)
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AA seq
512 aa
AA seq
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MSTAPDRLEAVRIEKLQKIEALGHDPWGQRFDDHLPIREVRAKAPAENGIDGETVRVAGR
ILRRNDRGKLKFFHILDMSGQIQLMVSKADIDENAWALIEELDLGDIIGVDGPVKRTRTG
EITIGIKALQILCKSLAQPPEKFHGVEDIEILLRHRHLDLIYTEGVVERMQLRTKILQSV
RNTLNERRFLEVETPVLHAVAGGAAARPFITHHNTLDIPLYLRIALELHLKRLMVGGIER
VYEMSRVFRNEGIDATHNPEFTMIEIYQAYGNYESMMDLTEAIITNAARVVVTERAKLAG
TEAPERLVMPWGDKEVDFTPPWQRRTYGDLFREHVGVDMADSAAVTEVAKKRGIETQGVH
PDVIISELFEAYVEDSLVGPVFVTDYPSSLCPLTKRKRGNPDIAERFELFVHGMELANAY
TELNDPLLQEELFRTQLAGMSEEDSMAKMDTEFVTALKTGMPPAGGLGIGIDRLIMLLLN
CRSIRDVIFFPLLKPEAPRGISGGTPEVPSPS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgctcccgaccgcctcgaagcggtccgcatcgaaaagctccagaagatcgaa
gcccttggccacgacccgtggggccagcggttcgacgaccatctgccgatccgcgaagtc
cgcgccaaagccccggctgagaacggcattgacggcgagaccgtccgcgtcgcgggccgg
attctccgccgcaacgaccgcggcaagctcaagttcttccacatcctcgacatgtccggc
cagatccagctcatggtgagcaaggcggatatcgacgagaacgcctgggcgctcatcgaa
gagctcgacctgggggacatcatcggcgtcgacggcccggtcaagcggacccggaccggc
gagatcacgatcggcatcaaggcgctgcagatcctctgcaagtcgctggcccagccgccg
gagaagttccacggcgtcgaggacatcgaaattctcctgcggcaccgccacctcgacctg
atctacactgagggggtcgtggagcggatgcagctccgcaccaagatcctgcagtcggtc
cgcaacacgctgaacgagcggcggttcctggaggtcgagaccccggtgctgcacgccgtt
gccggcggggcggcggctcggccgttcatcacgcaccacaacacgctcgatattcctctc
tatctccggattgccctcgagctgcatctcaagcggctgatggtgggcgggatcgagcgg
gtctacgaaatgagccgcgtcttccggaacgaagggattgatgccacgcacaatcctgag
ttcacgatgatcgagatctatcaggcctacggcaactacgagtcgatgatggacctcacg
gaggcgatcatcacgaacgccgcccgggtcgtcgtcaccgagcgggcgaagctggccggg
acggaagcccccgagcggctcgtcatgccctggggggacaaggaagtcgacttcacgccg
ccgtggcagcggcggacgtatggtgacctgttccgcgagcatgtcggggtcgacatggcg
gactcggcggcggtgacggaagtggcgaagaagcgggggatcgagacccagggggttcat
ccggacgtcattatcagcgagctgttcgaggcgtatgtcgaggacagtcttgtcggtccg
gtattcgtgaccgattacccgtcgtcgctctgtccgctgacgaagcggaagcggggcaac
ccggatatcgccgagcggtttgagctgttcgtgcatgggatggagctggcgaacgcttac
acggagctcaacgatccgctgttgcaggaggagttgttccggacgcagctggccgggatg
tctgaagaggactcgatggccaagatggacaccgagtttgtgacggcgctcaagaccggg
atgccgccggccggtgggttggggatcgggatcgatcgtctgatcatgctgctgctgaac
tgtcgcagcattcgggacgtgatcttcttcccgttgttgaagcctgaagcgccgcggggg
atcagtggtgggacgcccgaggttccgtcgccatcgtga
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