Planctomyces sp. SH-PL14: VT03_20040
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Entry
VT03_20040 CDS
T04354
Name
(GenBank) putative efflux pump membrane fusion protein
KO
K02005
HlyD family secretion protein
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
VT03_20040
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GFIT
Motif
Pfam:
BSH_CusB
YknX_C
Beta-barrel_RND_2
RND-MFP_C
BSH_RND
BSH_YknX
BSH_CzcB
Biotin_lipoyl
ZNF318_helical
DUF7491
BSH_YhbJ
AAA_13
BSH_Fcp1
Motif
Other DBs
NCBI-ProteinID:
AMV20198
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Position
5173393..5174946
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AA seq
517 aa
AA seq
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MGTEVNLRELALERTERRPVAGQRGKSAWVSRYAIPGTILAAFALLIGWATRDSFTTRRP
VTVTPVIVSRAEIQQSGTPLFQAAGWIEPRPTPINVAAMTEGVVQELRVVGGQAVNAGEA
IAQLIDTDAQYSVKEAQTALLLREAELKGVQAELRAAQSRREKPVHLHAQLAEAESLQAK
AQTELAKLPFQIRATAARLEFAKNNFEGKQSAGTAVTGRIVQQAESEYLALEAEAAELER
RKPSLELEVETLKKKTAALGEQLRLLVEETRQVEEAEAKEAGGKAAVEQARLKVERARLA
LDRTTIRSPISGVILQVVAHPGSRVMGLDSNATISSSTVVTMYDPTQLQIRADVRLEDVP
LVETGQPVEITTASSKETIRGTVLRPTSTANVQKNTLEVKVAIDNPPAALRPEMLVSTTF
LAPERAAEVNESPGETERLLVPKDLVDRSGSRPAVWVVDPSGLARQKGVTLGKASTPTLV
EIAEGLNVTDKLIVDGREGLRERDPVTISGETSGPGL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgaggtcaatctccgagaactggccctcgaacggaccgaacgccgacctgtg
gccggccagcgcgggaagagcgcctgggtgtcgcggtatgcgatacccggaacgatcctg
gcggcattcgcgctcctgattggctgggcgacgcgcgactcattcacgacgcgtcggccg
gtcacggtgacgccggtcatcgtgagccgggccgaaatccagcagtctggaacgccgctg
ttccaggcggcgggatggatcgagcctcggccgacgccgatcaacgtcgcggccatgacc
gaaggggtcgtccaggagctgcgggtcgtcggcggacaggcagtcaatgccggagaagcg
atcgcacagctcatcgacacggatgcccagtactccgttaaggaggcgcagacggccctg
ctccttcgtgaggcggagctgaagggagttcaggcggaactccgggcggcccaatcgcgg
cgggagaagccggttcacctccacgcacagcttgccgaggcagagtcgcttcaagcgaag
gcccagacggagctcgcgaagcttccgtttcagatccgggcaactgccgcccggctggag
tttgccaagaacaactttgaggggaagcagtcggccggaactgccgtcaccggccgcatc
gtgcagcaggcggaaagtgagtatctcgctctcgaagcggaagcggcggaactcgaacgc
cggaagccgagcttggagctggaagtcgagacgctcaagaagaagaccgcagccctcggc
gaacaactccggctgctggtggaggagacgcgccaggtggaggaggcggaggccaaggag
gcggggggcaaggccgccgtggaacaggcccggctgaaggttgagcgtgcccggctggcg
ctcgaccggacgacgatccgcagcccgatctcgggggtgatcctccaagtagtcgcccac
cccgggtcgcgggtcatggggctcgacagcaacgcgacgatcagttccagcactgtcgta
acgatgtacgacccaacccagctccagatccgggcggatgtccggctggaggatgttcca
ctcgtcgagactggacagcccgtcgagatcacgactgcttcgtcgaaagagacgattcga
gggaccgttctccggccaacctcgacggcgaacgtgcagaagaacaccctcgaagtgaag
gtcgccatcgacaatccgccggccgctctccgtccggagatgctcgtgtcgacgacgttc
ctggcgccggaacgggcagcggaggtaaacgaatcgcctggcgagaccgaacggcttctt
gttccgaaggacctcgtcgatcgtagcgggagccggcccgccgtctgggtcgtcgatccg
agtggcctggctcgtcagaaaggagtgacgctcggaaaggcgagtacgccgacccttgtc
gagatcgccgaggggctgaatgtcacagacaagctgatcgtggacggccgcgaagggtta
cgagagcgagatccggtcacgatcagcggtgaaacatccggcccggggctatga
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