Planctomyces sp. SH-PL14: VT03_20100
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Entry
VT03_20100 CDS
T04354
Symbol
rluD_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pls03009
]
VT03_20100 (rluD_1)
Enzymes [BR:
pls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VT03_20100 (rluD_1)
Ribosome biogenesis [BR:
pls03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT03_20100 (rluD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMV20210
LinkDB
All DBs
Position
complement(5192385..5193419)
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AA seq
344 aa
AA seq
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MLSGSSDTDRIELTVEEFSDGDRIDSFLSRHLRNYTMWRLQRMVREGNAWIDHAPIQQTR
RVFTGERVTIRLAEPPDRVMEGHPGPLRILYEDPWILVIDKPAGVIAHPTGEFQYGSLVN
ILQHWADQRFQPRGLIRPGLMHRLDRQTSGVMVIALQHHSHRMLAAAFEAGRVSKTYLAL
VEGRPKERKGSIKFPIGRVPTGRCVLMSCRADALDARPSQTNYEVLEQYARHTLVAATPL
TGRNHQIRVHFAHIGHPLIGDEFYLPHGHIRPLKEPPMSEEEEDAAEDEGIETGYAIRRH
ALHAGRLAFAHPVTNLWLEFTARLPEDMRETITELRAESAQPVP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgctctccggctcctccgataccgaccgcatcgaactcaccgtcgaggaattctccgac
ggcgaccgcatcgactcgttcctctcccgccaccttcgcaactacaccatgtggcgcctc
cagcgcatggttcgcgaaggaaacgcctggatcgaccacgcccccatccagcagacccgc
cgcgtcttcaccggcgaacgcgtcaccatccgcctcgccgagccccccgaccgcgtcatg
gaaggacacccggggcctctccggatcctctacgaagacccctggatcctcgtcatcgac
aaacccgccggcgtcatcgcccatcccaccggcgagttccagtacggctccctcgtcaac
atcctccagcactgggccgaccagcggttccaaccccgcggcctcatccgccccggcctc
atgcatcgcctcgaccgccagaccagcggcgtcatggtcatcgccctccagcaccactcc
caccgcatgctcgccgccgccttcgaagcgggccgcgtctccaagacctacctcgccctc
gtcgaaggccgccccaaggagcggaagggctcgatcaagttcccgatcggccgggtcccg
accggccgctgcgtcctcatgtcctgccgtgccgacgccctcgatgcccggccgtcccag
acgaattacgaggtcctggaacagtacgcccgccacaccctggtggccgcgacgccgctg
acggggcggaaccaccagatccgggtgcacttcgcccacatcggccacccgctgatcggc
gacgagttctacctgccgcacggtcacatccgcccgctcaaggaaccgccgatgagcgag
gaagaggaagacgcggccgaggatgaagggatcgagaccggctacgcgatccgccgccac
gcgctgcacgccgggcgtctcgcgttcgcccacccggtcacgaacctgtggctggagttc
acggcgcggctgccggaagacatgcgggagacgatcacggagcttcgagcggagtcggcg
caaccggttccttga
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