Planctomyces sp. SH-PL14: VT03_20180
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Entry
VT03_20180 CDS
T04354
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VT03_20180 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pls01007
]
VT03_20180 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pls03016
]
VT03_20180 (aspS)
03029 Mitochondrial biogenesis [BR:
pls03029
]
VT03_20180 (aspS)
Enzymes [BR:
pls01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
VT03_20180 (aspS)
Amino acid related enzymes [BR:
pls01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VT03_20180 (aspS)
Transfer RNA biogenesis [BR:
pls03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VT03_20180 (aspS)
Prokaryotic type
Other AARSs
VT03_20180 (aspS)
Mitochondrial biogenesis [BR:
pls03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
VT03_20180 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
AMV20226
UniProt:
A0A142WZW4
LinkDB
All DBs
Position
complement(5211620..5213392)
Genome browser
AA seq
590 aa
AA seq
DB search
MLRTHTCGELRPFHAGQTVTLCGWVDKYRDHAGIVFIDLRDRYGKTQIKFDLADSSEIQQ
QARHLRHEDVVQVSGKVVQRPEGLANPKLSTGEVELLVNEFSLLNKSKTPPFEPEGQSIP
NEEIRLEHRYIDLRRPALQQNLILRHKLTMAVRQYFDRLGFLEIETPMLGKSTPEGARDY
LVPSRVHEGHFYALPQSPQLYKQLLMVGGLDRYFQIARCFRDEDLRADRQPEFTQIDVEM
AFVERDDILNAIDGLVAEMTNQLRNEKIELPLKRYTYQECMEKYGSDKPDLRFGLPIVDI
GEIAAECDFGVFKQTVAAGNRVRGINAKGAAEKYSRKMLDVDMKGLVAEYGAKGVAYFKV
AGGKLESSIAKFFTEDQQRAIVQKFEGQDGDLLLFVADTFKVTSAALSAIRNKLGRELEL
YDPRSMQTFWVIDFPMFTWNAEENKWDAEHHPFCAIHPEDAEYLQTDPGRVRANSYDLVC
NGYEAASGSVRVHDSKTQARIFELLNIKAEEAEARFGFFLDALRYGAPPHAGVALGLDRW
VMLFTGGENIRDVIAFPKTQKAADAMSGAPSVVDFKQLRDLRIKIDIPAK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcggacacatacctgcggtgaactgcgaccctttcacgccggccagacggtgacg
ctctgcggctgggtggacaaataccgcgaccacgccggcatcgtcttcatcgacctccgg
gatcgttacggcaagacccagatcaagttcgacctcgcggactcgtcggagatccagcag
caggcccgtcacctgcggcacgaggacgtcgtgcaggtgagcggcaaggtggtccagcgg
cccgaggggcttgcgaaccccaagctctcgacgggcgaagtcgagcttctcgtcaacgag
ttttcgctcctcaacaagagcaagacgccgccgtttgagcccgaagggcagtcgatcccg
aacgaggagatccggctggagcatcgctacatcgacctgcggcggcccgccctccagcag
aacctcatcctccgccacaagctcacgatggcggtccggcaatacttcgaccggctcggg
ttcctcgagatcgagaccccgatgctcggcaagagtacgccggaaggagcccgcgattac
ctcgtcccgagccgcgtccatgaagggcacttctacgccctgccgcagtcgccgcagctc
tacaagcagctcctgatggtcggcggtctcgaccgctactttcagattgcccgctgcttc
cgcgacgaagacctccgggccgaccggcagccggagttcacgcagatcgacgtcgagatg
gcgttcgtcgagcgggacgacatcctcaacgcgatcgacggtctcgtggccgagatgacg
aaccagctccgcaacgagaagatcgagctgccgctgaagcgatacacctaccaggaatgc
atggagaagtacggcagcgacaagccggacctgcggttcggcctgccgatcgtcgacatc
ggcgagatcgcggcggagtgcgacttcggcgtcttcaagcagacggtcgccgctggcaac
cgcgtccgcgggatcaacgccaagggggcagcggagaagtacagccgcaagatgctcgac
gtcgacatgaagggcctcgtcgccgagtacggcgcgaagggtgtcgcctacttcaaggtc
gccggcgggaagctggaatcgtccatcgccaagttcttcaccgaggaccagcagcgggcg
atcgttcagaagttcgaaggccaggacggcgacctgctgctgttcgtggcggacaccttc
aaggtgacgagcgccgctctctcggcgatccgcaacaagctcggccgggagctggagctg
tacgatccgcggtcgatgcagaccttctgggtcatcgacttcccgatgttcacctggaac
gccgaagagaacaaatgggacgcggagcaccatccgttctgcgcgatccatccggaggac
gctgagtacctgcagaccgacccgggccgcgtgcgggcgaactcgtacgacctcgtctgc
aacggttacgaggcggcgagcggcagcgtccgcgtgcacgactccaagacccaggcccgg
atcttcgaactgctgaacatcaaggccgaagaagccgaggcccgcttcgggttcttcctc
gacgcgctccggtacggggccccgccgcacgccggcgtggcccttggtctcgaccggtgg
gtgatgctgttcacgggtggtgagaacatccgggacgtgatcgcgttcccgaagacgcag
aaggcggcggacgcgatgagcggcgccccgagcgttgtcgatttcaagcagctccgcgac
ctgcggatcaagatcgatattccggccaagtga
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