Planctomyces sp. SH-PL14: VT03_20415
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Entry
VT03_20415 CDS
T04354
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pls03009
]
VT03_20415 (rluB)
Enzymes [BR:
pls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VT03_20415 (rluB)
Ribosome biogenesis [BR:
pls03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT03_20415 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AMV20273
LinkDB
All DBs
Position
complement(5282511..5284217)
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AA seq
568 aa
AA seq
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MRNRGTQRTPLCGTGIEDSLKTHREHCNPRGLVEGASDTVSAFGHALLQTSLDGQASGGQ
GAFCPLHPLTRVPLDPVRLSTTPCPTTLYLPPHPSSLPHAGRNAPLPVSLSSMQDPSDYE
APETGPPPASPEIPKIRLQRFLAACGLGSRRACEEYITQGRVTVDGVEVTELGVTVNPSV
QKIMLDGERLRMERKKYYLFNKPTGVLCTNNDPKRRPRVVDFFPDAGPRLFTVGRLDEDS
EGLILVTNDGDLAQRMAHPRYRIYRTYLVQVAGFPTREIFDQLKKGVFFLEGKFKVHDVQ
TVKRQGQSMWLEVILSEGHNREIRRLFAKMGHKVMRLERIAFGPLSLGKLKAGEFRELRH
EELERLHSVLMKAEAQSRPSSKARKPARPGRPARANAPIKDAPRPLRPRRAPAAQMDEGE
PDFDLPLNRHPALPYGGRPADSPSDSPPPGGPRSGRPGGARPGAARSGSARPRSDRAGAG
DRETRPPRKGRPRAESVGDAPPAEARTPGHRAPRPKGAPAKGRPARFSEGGEKRPAFGEK
RFTKRTPKGEAKRRPQRRTKPRRGEGRG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaccgtggtacacaacggacgcccctttgtgggaccggcattgaggactccctc
aaaacacaccgcgagcattgcaatccccgtgggttagttgagggggcatccgacacggtg
tccgcgtttggacacgcgcttcttcagacatctctcgacggccaggcctccggcgggcaa
ggggcattctgccccctgcaccccctgaccagggtgcccctggacccggttagactttcg
accacaccctgcccaaccactctctaccttccgcctcacccctcctcactcccccacgct
gggcggaacgctcccctccccgtatccttgagctccatgcaagatccctccgattacgaa
gccccggaaaccggcccaccacccgcctctccggaaatccccaaaatccgcctccagagg
ttcctcgccgcctgcggactcgggtcccgccgtgcctgcgaagaatacatcacccagggc
cgagtcaccgtcgacggcgtcgaagtcaccgaactcggcgtcacggtgaacccctccgtc
cagaaaatcatgctggacggcgaacgcctccgcatggagcggaaaaagtactacctcttc
aacaaaccgaccggcgtcctctgcaccaataacgaccccaaacgccgaccccgcgtcgtc
gacttcttccccgacgccggaccccgactgttcaccgtcggccgcctcgacgaagacagc
gaaggcctgatcctcgttaccaacgacggcgacctcgcacagcggatggcccacccccgc
taccgcatctaccggacctacctcgtccaggtcgccggcttccccacccgcgagatcttc
gaccagctcaagaaaggggtcttcttcctcgaagggaagttcaaggtccacgacgtccag
accgtcaaacgccaaggccagagcatgtggctcgaggtcatcctcagcgaaggccacaac
cgcgagatccgccgcctcttcgccaagatgggccacaaggtcatgcggctggagcggatc
gccttcggccccctgagcctcggcaagctcaaggccggcgagttccgcgaactccgccac
gaagagctcgaacgactccactccgtcctcatgaaggccgaggcgcagtcccgtccttcg
agcaaggcccgcaaaccggcccggcccggtcgtccagcccgcgcgaacgccccgatcaag
gatgctccccgcccgcttcgcccccgccgggctcccgccgcgcagatggacgagggagaa
ccggacttcgatctcccgctgaaccggcacccggctctcccgtacggcggccgccccgcc
gactccccgtcagacagcccgcctccgggtggccctcgttcgggccgacccggtggtgcc
agacccggcgcggccagatccggttccgcccggccgcgctccgatcgggccggcgccgga
gaccgcgagacacgcccaccccgcaaaggacgtccgcgagccgagtccgtcggagacgct
ccgccggcggaagcgcgaacaccgggccaccgggctccccgcccgaagggcgccccggcc
aaaggccggccagcccgtttctccgaagggggcgaaaagcggccagccttcggcgagaaa
cgattcaccaaacgcacccccaaaggcgaagccaaacggcgcccccagcgcaggacgaag
ccacgccgcggcgaggggagaggctga
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