Planctomyces sp. SH-PL14: VT03_20900
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Entry
VT03_20900 CDS
T04354
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pls03016
]
VT03_20900 (truB)
Enzymes [BR:
pls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VT03_20900 (truB)
Transfer RNA biogenesis [BR:
pls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VT03_20900 (truB)
Prokaryotic type
VT03_20900 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Na_trans_cytopl
Motif
Other DBs
NCBI-ProteinID:
AMV20369
UniProt:
A0A142WZY5
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All DBs
Position
5426397..5427254
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AA seq
285 aa
AA seq
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MFGLLNINKPLRLTSRDVVNRVCKRVHPIKVGHAGTLDPLASGVLVVCVGHATRLVSYIQ
DESKTYIGTFVFGKRSETEDCEGVVEDVPVGHIPREELEAILPRFTGRIRQRPSQFSAIR
VGGQRAYERARKGQVVEVPERDVEIHALRCVEYDFPTFRLEVECGSGTYMRSLGRDIGLA
LGTHALMVGLERTRIGDFRIDDALSIEDLSADVIAAHLRSPLEALGRFPQVMLSSHDVAQ
LRMGRCLRHDCLLYAPPGEVVGVHAGEAVSLLRVHNNQLVPVMVF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtctcctcaacatcaacaaacccctccgtctcacttcccgcgacgtcgtcaac
cgcgtctgcaaacgggtgcatccgatcaaggtcggacatgccgggaccctcgacccgctg
gccagcggagtgctcgtcgtgtgcgtcggacacgcgacgcggctcgtgtcgtacatccag
gacgagagcaagacctacatcgggaccttcgtctttgggaaacggagcgagaccgaggac
tgtgaaggggttgtggaggacgtgcctgtcgggcacatcccgcgcgaggagctggaggcg
atcctgccgcggttcacggggcggattcgtcagcggccgtcgcagttctccgcgattcgt
gtcggggggcagcgagcttatgagcgggcgaggaaggggcaggtggtggaggtcccggag
cgggatgtggagattcatgcgctccgctgcgtggagtacgactttcccacgtttcggctg
gaggtcgagtgcgggtcagggacctatatgcggtcgctggggcgggatatcgggctggct
ctcgggacccatgcgctgatggtgggcctggagcggacgcggatcggggactttcggatc
gacgacgcgctgtcgatcgaggatttgagtgcggacgtgattgcggcgcatctccgctcg
ccgctggaggctctggggcggtttccgcaggtgatgctgagttcacacgatgtggctcag
ttgcggatggggcggtgcctgcggcatgactgtctgctctacgcgcctcccggtgaggtt
gtgggggttcatgcgggcgaagcggtgtcgctgctgcgggtccacaacaaccagctcgtg
ccggtcatggtcttctga
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