KEGG   Planctomyces sp. SH-PL14: VT03_20920
Entry
VT03_20920        CDS       T04354                                 
Name
(GenBank) translocation protein TolB
Organism
pls  Planctomyces sp. SH-PL14
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_VPS8 DSE1_N Beta-prop_WDR75_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_IFT140_1st CFAP251_N Beta-prop_NOL10_N Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_RIG_2nd Tricorn_2nd Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N ASA1 Beta-prop_TEP1_C PD40 Ge1_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 WDR54 Beta-prop_NWD2_C eIF2A Nbas_N Beta-prop_DCAF4 PAC11 TRM82_WD Tricorn_N WD_LRWD1 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st SGL Beta-prop_LRRK2 Beta-prop_IFT80_2nd DUF7165 Myco_19_kDa Beta-prop_pof12
Other DBs
NCBI-ProteinID: AMV20373
LinkDB
Position
complement(5433358..5435295)
AA seq 645 aa
MTVAEDDAAGATTSLGPGPSSPFGCPVRFLSMLAVCGLAAVVLLGNVATGQAPEVTLERV
IRTEGHTSEVFCVARSGDRKWLVSGGFDRTVRLWDVATGRNTVTLAGHTHTVNSVAVSPD
GRTIASGSGDGTVRLWDVATKESTHVLQGNGIGVNTVAFSPDGTVLAEGRDDGTIRLWDV
AAGRERSTLSRHEEAVSCLAFRPDGKQLASGGDDHAVLIWDLEKSMIARRLEGAKSFVNT
VAWNPDGTRVAAGGEDKVVRIWNAATGEKIRELPALPDAVTTLAFSPDGAQLFAGGDRGS
LRLWEVDSGQERATSVAAAPVLRVEFDPEGHPQAVTRRDGMIWLWDLGAKAATATFESSS
AFLSIAFHPDGKRLASGNGRGLVQVWDGTTGESLRTFKEHHGPVRAVQFNGAGMLASAGD
DGIVRTWNVEMGLERIVFEGRNGPIRCLAWCDEGRLLAFGMPIGAVLLSDPATSALRASL
VIHRSQVKVLAASRDGMSLASGGEDSPIGLYAIMPKPSTRGSLVGQTGPVWTLAFAPDGK
RLASSGDSRTIRLWDVAAGKVVMELTRHQAPVESVAFSPDGKWLVSGANDRQVILWNAET
GEPVVRLLGHTDSVTSVVCSPDGTRLASAAADGTIRLWKGLPQEN
NT seq 1938 nt   +upstreamnt  +downstreamnt
ttgaccgtcgcggaggacgatgccgccggcgcgacgaccagcctcggtcccggcccttcg
tccccgttcgggtgcccggtgcggttcctttcgatgctcgccgtctgcgggctggccgcg
gtcgtgctgctgggcaatgtcgctactgggcaggcgccggaggtcaccctggagcgggtg
atccggaccgaggggcacacgtccgaagtcttctgcgtcgcgcggagcggcgaccggaag
tggctcgtcagcggcggattcgatcgcacggtccggctgtgggatgtcgctaccgggcgg
aacactgtcacgcttgccgggcatacgcatacggtcaacagcgttgcggtctcgcccgat
ggccggacgatcgcgagtggcagcggcgatgggaccgtccggctgtgggacgtcgcgacg
aaggagtcgacgcacgtcctccagggaaacgggatcggcgtgaacaccgttgccttctcg
ccggacggaactgtcctggcggaggggcgcgacgacggcacgatccggctgtgggatgtt
gccgccggccgggagcgctccacgctttcgcgccatgaagaagcggtgtcgtgcctcgcg
ttccgccccgatggaaagcagctcgcgagcggcggggacgaccatgccgtcctgatctgg
gatcttgagaagagcatgatcgcccgccgactcgaaggggcgaagagcttcgtgaacacg
gtcgcctggaatcccgacgggacgcgcgtcgccgcggggggtgaggacaaggtcgtgcgg
atctggaatgcggcgaccggcgagaagatccgtgaactccccgcgctgccggacgccgtc
acgacgctcgcattcagcccggacggggcacagcttttcgccgggggggatcggggatcg
ctgcggctgtgggaggtcgactccgggcaggaacgagccacctccgtcgccgccgcgccg
gtcctgcgggtcgagtttgatcccgagggacacccgcaggcggtgacgcgccgggatggg
atgatctggttgtgggatttgggggcgaaggcggcgacggcgacgtttgagtcgtcgtcc
gcgtttctgagcatcgccttccacccggacgggaaacggctggcgagcggcaatggccgg
gggcttgtgcaggtctgggatgggacgacgggcgaatcgctgcggacgttcaaggaacac
cacggcccggtccgtgccgtccagttcaacggcgccgggatgctggccagcgcgggcgat
gacgggatcgtgcggacgtggaacgttgagatgggactcgagcggatcgttttcgaaggt
cgcaacggaccgatccgctgcctggcctggtgcgacgaggggcggttgctggccttcggg
atgccgatcggtgccgtcctgttgagcgatccggccacctccgcactgcgggcctccctg
gtcattcaccgcagccaggtcaaagtcctcgccgcgagccgcgacggcatgagtctggcg
agcgggggtgaagactcgccgatcgggctgtacgcgatcatgccaaagccttcgactcgc
gggagtctggtgggtcagacgggccccgtctggacgctggcctttgctccggacggtaag
cggctggccagcagcggcgactcgcggacgatccgtctttgggatgtggcggccgggaag
gttgtgatggagctgacgcggcatcaggcgccggtggagagtgttgccttcagtcccgat
gggaagtggcttgtctcgggggcgaacgatcggcaggtgatcttgtggaatgccgagacg
ggtgagccggtggtccggttgttggggcacacggattcggtgacgagtgtcgtttgcagt
ccggatgggacgaggttggcaagcgcggcggcggatggcacgatccggctttggaagggc
ctgccgcaagaaaactag

DBGET integrated database retrieval system