Planctomyces sp. SH-PL14: VT03_22690
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Entry
VT03_22690 CDS
T04354
Symbol
alkA_2
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT03_22690 (alkA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_22690 (alkA_2)
Enzymes [BR:
pls01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VT03_22690 (alkA_2)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT03_22690 (alkA_2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
TTC3_DZIP3_dom
Motif
Other DBs
NCBI-ProteinID:
AMV20726
UniProt:
A0A142X1C6
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All DBs
Position
complement(5825235..5825912)
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AA seq
225 aa
AA seq
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MNAKSRTTAVHVLSAAEIEAARQRLSAADPVLAIAHAEVAPFEWRIRDAGFIGLVQLICE
QQVSVASAAAIWKRLQQGVGTVTAENVSTFDVETLRTFGLSRPKAVYVRALADAESSGAI
DFGRLRDLDDEAAIEALTALKGIGRWTAEVYLMFCEGRTDLFPAKDLALQESYRWAARTP
ARPTEKELSERARRWQPDRGIAAHLLWCYYRAIKAGTIPAPEIAR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccaagtctcgaacgactgccgtccatgtcctgtccgccgcggagatcgaggcc
gcgcggcaacggctgagcgcggccgatccggtcctggcgatcgcccatgcagaggtggca
ccgttcgagtggcgtatccgggatgccgggttcatcggcctcgtgcagctgatctgcgaa
cagcaggtctccgtcgcctcggcggccgcgatctggaagcgactccaacagggggtcggg
accgtcacggcggagaatgtcagcacctttgatgtcgagacgttgcggacgttcggcctc
tccaggccgaaggcggtctacgtacgagccctcgcggacgcggagtcgtcaggcgcgatc
gacttcgggcggttaagagacttggatgacgaggcggcgatcgaagcgttgacggcgctc
aaggggatcggccgatggacggccgaggtctatctgatgttctgcgagggacgcaccgat
ctgtttcccgcgaaggacctcgccctccaggagagctaccgctgggccgcccgaaccccg
gctcgtcccacggagaaagaactctccgaacgagcccgtcgctggcagcccgaccgaggc
atcgccgcccacctgctgtggtgctactaccgggccatcaaggccggaacgatccccgcc
ccggagattgcccggtag
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