Planctomyces sp. SH-PL14: VT03_22840
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Entry
VT03_22840 CDS
T04354
Symbol
pcrA_3
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03420
Nucleotide excision repair
pls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VT03_22840 (pcrA_3)
03430 Mismatch repair
VT03_22840 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_22840 (pcrA_3)
Enzymes [BR:
pls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VT03_22840 (pcrA_3)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VT03_22840 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
VT03_22840 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMV20756
UniProt:
A0A142X1F5
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Position
complement(5860457..5862250)
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AA seq
597 aa
AA seq
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MPQVARIIGGAGTGKTTYLLERMDAALSTGGYTPFDVGFCSFTRAACLEAARRAGAKFDV
DPADLAQHGWFKTLHACCYRLVGIKGNQLLAGNKKDREWLTAALQEEISETGTTPDLLYG
NGDDVFAARTDADRILSLWSTARSRLVTLEKVWEPARYCDERTPDLARCREIVARYEQAK
RIDGRIDFVDLLGRYAGVRWSDARGPRETTALGDIPDVPVWFLDEQQDTSPLLDRVSRRL
VSRARWIYLCLDPFQAIYGWNGADARCAMGWPAKKQQVMPRTWRCPAPVQQLGGRILRSC
TDYWDRQIAPAPHRGEITAAGWREAEWLERICDEIRHPTSTTASGGRQPPDQHANRVTTA
TASRATSRRPTHMLLARSNYHASRIARRLDALHIPWLPTTGQPNRWNAPVRQAAIMGFRI
AQDGYMALGPWRQIVRQIPSEGNLVRGTKARFEETTPSGIAAAEDSGTPGGDEWLSIETS
RLTEWGATEALIRRIQSGEWVSLIDGAAAVLRAIDDYGPDAVESPRVLVGTIHSAKGMEA
DNVYLLTTLSHQVIRGMETTAGADEERRVQYVGVTRARHRLTLLQEGDARYAMDLPT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagtcgcccggatcatcggtggagccggcaccggcaaaacgacctacctcctc
gaacgcatggacgccgctctctcaacaggcggctacacccccttcgatgtcggcttctgc
tccttcactcgcgccgcctgtctggaagcggcacggagggccggagcgaagttcgacgtc
gaccccgccgacctcgcccagcacggctggttcaagaccctgcatgcctgctgctaccga
ctcgtcggcatcaagggaaaccagctcctcgccggaaacaagaaggaccgcgagtggctc
accgccgcgctccaggaggagatctccgaaacaggaaccaccccggacctcctctacggc
aacggcgacgacgtcttcgcggccaggaccgacgccgaccggatcctctccctctggtcc
acggccagaagtcgactggtcacgctggaaaaggtctgggagccggcaaggtactgcgac
gaacgcacccccgacctcgcacgctgccgggagatcgtcgcgaggtacgagcaggccaag
cggatcgacggacggatcgatttcgtcgacctcctgggccggtacgccggagtccgctgg
agcgacgcccgcggcccgcgggagacaacggccctgggggacatccccgacgtcccggtc
tggtttctcgacgaacagcaggacacctcgccgctcctcgaccgggtcagccggcgtctc
gtctcacgggcgcgatggatctacctgtgcctcgacccgttccaggcgatctacggctgg
aacggagcggacgcgcggtgcgccatgggctggcccgcaaagaaacagcaggtcatgccg
cgaacctggcgctgccccgcgccggtacagcagttgggagggcggatcctgcgttcgtgc
acggactattgggaccggcagatcgcccccgcgccgcatcgaggcgagatcacggccgca
ggctggcgggaggccgaatggctggagcggatctgcgacgaaatccgccaccccacttcc
acaacggcgagcggggggcgtcagccccctgatcaacacgccaacagagtcacgacggcc
acggccagcagagcgaccagccgccgccccacccacatgctcctcgcccgaagcaactac
cacgccagccggatcgcccgtcgtctcgacgcgctgcacatcccctggctgccgacgacc
ggccaacccaaccgctggaacgcccccgtgcggcaggcggcgatcatgggtttccggatc
gcgcaggacggctacatggccctcggaccctggcgtcagatcgtgcggcagatcccgtcc
gaaggaaacctggtgcgaggaaccaaggcccgcttcgaggagaccaccccttcgggcatc
gccgcagcggaagactccgggacacccggcggcgacgaatggctctccatcgagaccagc
cgcttgaccgaatggggagcgacggaagccctcatccgcaggatccagtccggtgagtgg
gtctcgctcatcgacggagcggccgcggtcctgcgggcgatcgatgactacggtccggac
gcggtcgagtcgccgcgggtcctcgtcggaacgatccacagcgccaagggaatggaggcg
gacaacgtctacctcctgaccacactgtcgcaccaggtgatccgggggatggagaccacc
gcgggggccgatgaagaacggcgtgtccagtacgtcggcgtcacccgagcccgacaccgc
ctgacgctcctccaagaaggggacgcccgctatgccatggacctgccgacatga
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