Planctomyces sp. SH-PL14: VT03_23240
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Entry
VT03_23240 CDS
T04354
Symbol
barA_4
Name
(GenBank) Signal transduction histidine-protein kinase BarA
Organism
pls
Planctomyces sp. SH-PL14
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HAMP_His_kinase_fung
HATPase_c
HisKA
GAF_2
YscO-like
PII1_coiled_coil
AF_0408_N
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
AMV20836
LinkDB
All DBs
Position
5959863..5967062
Genome browser
AA seq
2399 aa
AA seq
DB search
MSDKPSRGVSRKPATLGADDATQAVLADEPGRTAVAGLGVSEESDTPSSGDSQAALRQIL
TAMSAFRDGDFSVRLPVDWGGLEGRIADAFNQAVAQEDRITLEIKQLSVTVGKEGRLKQR
LAMSGAVGGWAVRSESINTLIDDLVRPTTEVARTIGAVAKGDLSQSMELEVDGDPLQGEF
LRSARLVNTMIDQLSVFTSEVTRVAREVGTEGKLGGQAQVKGVSGVWKELTESVNQMAGN
LTAQVRNIADVTIAVANGDLSKKITVDVRGEILQLKEAINTMVDQLRSFASEVTRVAREV
GTDGRLGGQAVVPGVAGTWKDLTDSVNAMAGNLTAQVRNIAAVTTAVARGDLSRKITVDV
KGEILELKETINTMVDQLNGFAAEVTRVAREVGTEGKLGGQARAPGVAGTWKDLTDSVNS
MASNLTGQVRNIADVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNSFASEVTRV
AREVGSEGKLGGQAVVPGVGGTWKDLTDNVNSMASNLTGQVRNIADVATAIAKGDLSSKI
TVAAQGEILELKDTINTMVDQLNGFAAEVTRVAREVGTEGKLGGQAEVPGVAGTWKDLTD
NVNSMANNLTGQVRNIADVTTAVARGDLSRKITVDVKGEILELKNTVNTMVDQLNGFASE
VSRVAREVGTEGKLGGQAAVPGVAGTWKDLTDNVNSMASNLTGQVRNIADVATAVANGDL
SKKITVDVKGEILELKLTINTMVDQLNAFASEVSRVAREVGTEGKLGGQAQVRGVAGTWK
DLTDNVNSMASNLTGQVRNIADVATAIAKGDLSKKITVDVKGEILELKNTVNTMVDQLNA
FASEVSRVAREVGTEGKLGGQAAVEGVAGTWKDLTDNVNSMASNLTGQVRNIADVTTAVA
RGDLSRKITVDVRGEILELKNTINTMVDQLNAFASEVSRVAREVGTEGKLGGQAQVPGVA
GTWKDLTDNVNSMASNLTSQVRNIAEVTIAVANGDLSKKITVDVRGEILALKETINTMVD
QLRSFASEVTRVAREVGTDGKLGGQAQVPGVAGTWKDLTDSVNSMASNLTDQVRNIADVT
TAVARGDLSRKITVDVKGEILQLKETVNTMVDQLSAFASEVTRVAREVGTEGKLGGQAQV
LGVAGTWKDLTDNVNSMASNLTGQVRNIADVTIAVANGDLSKKITVDVRGEILQLKETIN
TMVEQLRSFASEVTRVAREVGTEGRLGVQAVVPGVGGTWKDLTDSVNTMGSNLTAQVRNI
AEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFASEVTRVAREVGTEGKLGG
QAQVSGVAGTWKDLTDNVNFMASNLTDQVRGIVKVVTAVADGNLRQKLTVQAKGEVAALG
ETINNMTDTLATFSEQVISVAREVGVEGRLGGQANVPGVSGTWRDLTDNVNLLAGNLTTQ
VRAIAEVATAVTKGDLTRSIQVATRGEVAELKDNINTMIANLRETTERNKEQDWLKTNVA
RFTSMLQGQRDLVTVGKMLLAELVPLVNAQQGAIYQMADSDFDVPTLKLLAAYARTMHQK
DRIGIGEGLVGQCASGKQRIHLTDVPRDYILVQSSLGETPPSSIVVLPLLFEGHVKAVIE
LASIHPFTATNLTFLEQLTQSIGVVLNTIEATMRTEGLLTQSQQLTVELQSRQSELQQTN
EELGTKAKLLAEQNEEVERKNREVEQARRALEEQAAELALTSKYKSEFLANMSHELRTPL
NSILILSQQLADNAPGNLSPRQIEFARNVNSSGTDLLHLINDILDLSKIESGTVTVESEE
ISFSALRDTIERNFRHVAENKNLPFEVRFSPNLPPFLSSDPKRLQQILKNLLSNAVKFTT
HGHVHVRAELARTGFSPDHPILSKADQVIAFAVEDTGIGVPLEKQRLIFEAFQQADAGTA
RKYGGTGLGLAISRELASLLGGEIRLTSVAGQGSTFTLYLPVRYAGPTGAGAAAPDRSSP
VALPQSVVPVHAVAAEEPILDDRDEITEGDSALLIIEDDPHYARILLGLARDSGFKGIVA
LRGAVGLTLARRYRPTAISLDIFLPDMLGWTVLNTLKSDPSLRHIPVQIITMEEERQHGL
AHGAFSYVVKSPTTDSLEAAFDRLKVFTSPRAKRLLIVEDNQIERDSIVALLEHDDIELS
AVSTGREAYKALLDRPFDCMVLDLRLPDMTGFDLLEKVHADRHLQEIPVVVFTGKELTDA
EQTRLRTMAKSIILKDVQSPERLLDETALFLHRVISDLPIEKQRMLERLHRSNEALRRRK
VLVVDDDARNIFALTTVLEGQEMEVLTATNGRQAIELIQKTPDLSIVLMDIMMPEMDGYE
TMQRIRDDARFRTLPILALTAKAMKGDREKCLDAGASDYIAKPVNTDQLLSLMRVWLFR
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagccttcccgcggcgtttcccggaaaccggcgactctcggcgcggatgac
gcgacccaggcggtcctggccgatgagccggggcggaccgcggtcgccggtctgggcgtt
tcggaggagtccgacacgccttcgtccggcgacagccaggcggcgctgcggcagatcctg
accgcgatgtccgccttccgcgacggggacttttccgtgcggctgccggtcgactggggc
ggtctcgaagggcggatcgcggacgccttcaaccaggcggtcgcgcaggaagaccggatc
acgctggagatcaagcagctcagcgtcaccgtcggaaaagaggggcggctgaagcagcgg
ctggcgatgtcgggggcggtcggcgggtgggcggtccggtcggagtcgatcaacaccctg
atcgacgaccttgtccgtccgacgaccgaagtcgcccgcacgatcggcgccgtcgccaag
ggggacctgagccagtcgatggagctcgaagtcgacggcgatccgctgcagggggagttc
ctccgctcggcgcggctcgtcaacacgatgatcgaccagctctcggtcttcacctcggaa
gtgacccgcgtcgcccgcgaggtcgggaccgaggggaagctggggggccaggcgcaggtc
aagggggtgtcgggggtctggaaagaactgaccgagtcggtgaaccagatggcggggaac
ctgaccgcccaggtgcgaaacatcgccgacgtcacgatcgcggtggcgaacggcgacttg
tcgaagaagatcaccgtcgacgtccgcggggaaatcctccagctcaaggaagccatcaac
acgatggtggaccagctccgctcgttcgcctcggaagtgacccgcgtcgcccgcgaggtc
gggaccgacggccgcctcggcggtcaggcggtggtccccggggtcgccgggacgtggaag
gatctcaccgactccgtgaacgccatggcggggaatctgacggcccaggtccggaacatc
gcggcggtgacgaccgccgtggcccgcggcgacctgtcgcggaagatcaccgtcgacgtg
aagggggagattctcgaattgaaggagaccatcaacacgatggtcgaccagctcaacggc
ttcgcggcggaagtgacccgcgtggcccgcgaggtcgggaccgaggggaaactcggcggt
caggcgcgggctcccggtgtggcgggaacgtggaaggacctcaccgactccgtgaactcg
atggcctcgaacctgaccggccaggtgcgaaacatcgccgacgtcacgaccgccgtggcg
cggggagacctctcccgcaagatcaccgtcgacgtgaagggggagatcctggagctgaaa
aacaccatcaacacgatggtcgaccagctcaacagctttgcctcggaagtgacccgcgtg
gcccgcgaagtcgggtcggaagggaagctcggcggtcaggcggtggtccccggggtcggc
gggacgtggaaggacctgacggacaacgtgaactcgatggcctcgaacctgacgggccag
gtgcggaacatcgccgacgtcgcgaccgccatcgccaagggggacctgtcgtccaagatc
accgtggcggcccagggggagatcctcgagttgaaggacacgatcaacacgatggtcgac
cagctcaacgggtttgcggcggaagtgacccgcgtggcccgcgaagtggggaccgaaggg
aagctgggcgggcaggcggaagtccccggggtggcggggacgtggaaggacctgaccgac
aacgtgaactcgatggcgaacaacctgaccggtcaggtgcggaatatcgccgacgtcacg
accgccgtggcccgcggcgacttgtcgcggaagatcaccgtcgacgtgaagggggaaatt
ctggagctgaagaacaccgtcaacacgatggtggaccagctgaacggcttcgcgtcggaa
gtctcccgcgtggcccgcgaagtcgggaccgaagggaagctcggggggcaggcggcggtc
cccggggtggcagggacgtggaaggacctgacggacaacgtgaactcgatggcgtcgaac
ctgaccggtcaggtgcggaacattgccgacgtcgcgaccgccgtggcgaacggagacctt
tcgaagaagatcaccgtcgacgtgaagggggaaatcctcgagctgaagctgacgatcaac
acgatggtggaccagctcaacgccttcgcctcggaagtctcccgcgtggcccgcgaagtc
gggaccgaagggaagctcgggggccaggcccaggtccgcggcgtggcggggacgtggaag
gacctgacggacaacgtgaactcgatggcgtcgaacctgacgggccaggtgcggaacatc
gccgacgtcgcgaccgccatcgccaagggggacctgtcgaagaagatcaccgtcgacgtg
aagggggaaattctggagctgaagaacaccgtcaacacgatggtggaccagctcaacgcc
tttgcctcggaagtctcccgcgtggcccgtgaagtcgggaccgaaggcaagctcggcggt
caggcggcggtcgaaggggtcgccgggacgtggaaggacctgacggacaatgtgaactcg
atggcctcgaacctgaccggtcaggtccggaacatcgccgacgtcacgaccgccgtggcc
cgcggcgacttgtcccgcaagatcaccgtcgacgtccgcggggaaattctggagctgaag
aacaccatcaacacgatggtggaccagctcaacgccttcgcgtccgaagtgtcgcgcgtc
gcccgtgaagtcgggaccgaggggaagctcgggggccaggcgcaggtgccgggtgtcgcc
ggaacgtggaaggacctgacggacaacgtgaactcgatggcgtcgaacctgacgagccag
gtccggaacatcgcggaagtgacgatcgccgtggcgaacggggacctctcgaagaagatc
accgtcgacgtccgcggcgaaatcctggccctcaaagagaccatcaacacgatggtcgac
cagctccgctcgttcgcctcggaagtgacccgcgtcgcccgcgaggtggggaccgacggc
aagctcggcggtcaggcccaggtgcccggtgtggcggggacgtggaaggacctgaccgac
tccgtgaactcgatggcctccaacctgaccgaccaggtgcggaacatcgccgacgtgacg
accgccgtcgcccggggggacctctcccggaagatcaccgtcgacgtgaagggggaaatc
ctccagctcaaagagaccgtcaacacgatggtggaccagctctccgccttcgcctcggaa
gtgacccgcgtggcccgcgaagtcggaaccgaagggaagctcgggggccaggcgcaggtg
ctcggggtcgccgggacgtggaaggacctgacggacaacgtgaactcgatggcgtcgaac
ctgacggggcaggttcgaaacatcgccgacgtcacgattgccgtggcgaacggagacctg
tcgaagaagatcaccgtcgacgttcgcggggaaatcctccagttgaaggagaccatcaac
acgatggtcgagcagctccgctcgttcgcgtcggaagtgacccgcgtcgcccgcgaggtg
gggaccgagggacggctcggggtgcaggcggtcgtccccggcgtcggggggacgtggaag
gacctgaccgactccgtcaacacgatgggctcgaacctgacggcccaggtgcggaacatc
gcggaagtgacgaccgccgtggcccgcggggacctctcgcggaagatcaccgtcgacgtg
aagggggaaatcctggagctcaagaacaccatcaacacgatggtggaccagctcaacgcc
ttcgcgtcggaagtgacccgcgtggcccgcgaggtggggacggaagggaagctcggcggt
caggcgcaggtgtcgggagtcgccgggacctggaaggacctgacggacaacgtgaacttc
atggcctcgaacctgaccgaccaggtccgcgggatcgtgaaggtcgtgaccgccgtggcg
gacgggaacctgcggcagaagctgaccgtgcaggccaagggagaagtggcggccctcggt
gagacgatcaataacatgaccgacacgctcgccacgttctccgagcaggtcatcagcgtg
gcccgcgaggtgggggtcgaagggcggctcggcgggcaggcgaacgtccccggcgtgtcg
ggaacgtggcgcgacctgacggacaacgtgaacctcctggcggggaacctgacgacgcag
gtccgggccatcgccgaggtggcgaccgcggtcaccaagggggacctgacccgctcgatc
caggtggcgacccgcggggaagtggccgagctcaaagacaacatcaacacgatgatcgcc
aacctccgcgagacgaccgagcggaacaaggagcaggactggctgaagacgaacgtggcc
cgcttcaccagcatgctccaggggcagcgggacctcgtgaccgtcggcaagatgttgctc
gcggaactggtcccgctcgtgaacgcccagcagggggcgatctaccagatggcggactcc
gacttcgacgtcccgacgctgaagctcctggcggcctatgcccggaccatgcaccagaag
gaccggatcgggatcggggaagggctggtcggccagtgcgcctccggcaagcagcggatc
cacctcaccgacgtgccgcgggactacatcctggtccagtcgagcctcggagagacgccg
ccgtcgagcatcgtcgtgttgccgctcctcttcgaagggcacgtcaaggcggtgattgag
ctcgcctcgatccatcccttcaccgcgacgaacctgaccttcctggagcagctcacgcag
agcatcggggtcgtgctcaacaccattgaggcgacgatgcggaccgaagggctcctgacg
cagtcgcagcagctcacggtcgagctccagtcgcggcagagcgagctccagcagacgaac
gaggagctggggaccaaggccaagctgctcgccgagcagaacgaggaagtggaacggaag
aaccgcgaagtggagcaggcccgccgggccctcgaagagcaggccgcggagctggccctc
acctccaagtacaagtccgagttcctggcgaacatgtcgcacgagctccggacgccgctg
aactcgatcctgatcctcagccagcagctcgccgacaacgcccccggcaacctctcgccg
cggcagatcgagttcgcccgcaacgtgaactcgtcggggacggacctgctgcacctcatc
aacgacatcctcgacctgtcgaagatcgagtccgggaccgtcaccgtcgagtccgaggag
atctcgttcagcgccctgcgggacacgatcgagcggaacttccggcacgtcgccgagaac
aagaacctcccgttcgaggtccggttctctcccaaccttccgccgttcctctcgagcgac
cccaagcggctgcagcagatcctcaagaacctgctctcgaacgcggtgaagttcacgacg
cacgggcacgtgcacgtccgggcggagctggcccggaccggcttctcgccggaccatccg
attctttccaaggcggaccaggtgatcgcgttcgcggtcgaggacaccggcatcggggtc
ccgctcgagaagcagcggctgatcttcgaggcgttccagcaggcggacgccgggaccgcc
cgcaagtacggggggaccgggctggggctggcgatcagccgcgagctggccagcctgctg
gggggcgagatccggctgacgagcgtcgcggggcaggggagcaccttcacgctctatctg
ccggtgcgatacgccggcccgaccggggccggagctgccgcgcccgaccggagcagcccc
gtggcgctcccgcagtcggtcgttccggtccacgcggtcgccgccgaggagccgatcctc
gacgaccgggacgagatcaccgaaggggactcggcgctcctgatcatcgaggacgacccg
cattacgcccggatcctgctggggctggctcgcgacagcgggttcaaggggatcgtggcc
ctgcggggggcggtcgggctgacgctggcccgccgctaccggccgaccgcgatctcgctc
gacatcttcctccccgacatgctgggctggacggtcctcaataccctcaagtccgatccg
tcgctgcggcacatcccggtgcagatcatcaccatggaggaagagcggcagcacgggctg
gcgcacggggcgttctcgtacgtcgtcaagtcccccacgaccgacagcctggaagcggcc
ttcgaccggctcaaggtcttcacctcgccgcgggccaagcggctcctgatcgtggaggac
aaccagatcgagcgggactccatcgtggccctcctggagcacgacgacatcgagctctcg
gcggtctcgaccggccgcgaggcctacaaggcgctcctcgaccggccgttcgactgcatg
gtcctcgacctgcggctgccggacatgaccggcttcgatctcctggagaaggtccacgcc
gaccggcacctgcaggagatccccgtggtggtcttcaccggcaaggagctgacggatgcg
gagcagacccgcctgcggacgatggccaagagcatcatcctgaaagacgtgcagtccccc
gagcgcctcctggacgagaccgccctcttcctgcaccgcgtgatctccgacctgccgatc
gagaagcagcggatgctggagcggctgcaccgctcgaacgaggcgctccgtcgccggaag
gtgctggtcgtcgacgacgacgcccggaacatttttgccctgacgacggtgctcgaaggg
caggagatggaggtcctcacggccacgaacggacgtcaggcgatcgagctgattcagaag
acgccggacctgagcatcgtgctcatggacattatgatgccggagatggacgggtacgag
acgatgcagcggatccgggacgacgcgcggttccggactctcccgatcctggcgctgacg
gccaaggccatgaagggggaccgggagaagtgtctcgacgccggggcgtcggactacatc
gccaagccggtcaacacggaccagctcctctcgctgatgcgggtgtggctgttccggtaa
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