Planctomyces sp. SH-PL14: VT03_24250
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Entry
VT03_24250 CDS
T04354
Symbol
lysA_2
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00300
Lysine biosynthesis
pls00470
D-Amino acid metabolism
pls01100
Metabolic pathways
pls01110
Biosynthesis of secondary metabolites
pls01120
Microbial metabolism in diverse environments
pls01230
Biosynthesis of amino acids
Module
pls_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VT03_24250 (lysA_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VT03_24250 (lysA_2)
Enzymes [BR:
pls01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VT03_24250 (lysA_2)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMV21037
UniProt:
A0A142X1U8
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Position
complement(6255106..6256593)
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AA seq
495 aa
AA seq
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MPRLTLTRRLKRAVTSVMVERVVRADRRERAGLPREHGGLTPQLWGCGVNDRGELAIRDV
SLVDLARQYGTPLHVVDRERLVRNVEDFLGPFRQRYPRVRLASSYKTNPVPGVLQILHEA
GTLAEVISPFELWLALQLGVPGEQIVYNGPGKTPESLRQAVEAGIRLIHVDGLHEIETIA
AAAREFGKRPRVGLRVVTSVGWSGQFGLSLADGSALGAFAEMRRHPALEPVGLHLHIGTG
VKDVAAYATAVEEVLRFAGTLQRKLGVTIESFDFGGGFGVPTVRTRSAWDDRLNHHGHPA
RLAIPADCPTPDDYAAALVPLIRKHCGDREPEILLEPGRAITSSAQVLLLRVLAVKEAGD
GRRSVILDGGKNLTLPLEWETHQIFPASRMNEPEAATCDLYGPLCHPGDVLARHKRMPAP
RAGDILAVMDAGAYFVPNQLNFSQPRPAIVLIEGRHVRCLRERERFEDIVRLDECVRSDT
GSRAASPVVFPPGAT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggctgacgctgacgcgacgactcaaacgggccgtgacctccgtcatggtcgag
cgggtcgtccgcgccgatcggcgggagcgggcgggcctgccgcgcgagcacggggggctc
actccccagctgtggggctgcggcgttaacgaccgcggtgagctcgcgatccgggatgtc
tcgctcgtcgacctcgcccggcagtacggcacgccgctgcatgtcgtcgaccgcgagcgg
ctggtgcggaacgtcgaagacttcctcggccccttccggcagcggtatccccgcgtccgg
ctcgcctcctcgtacaagaccaatcccgtccccggcgtcctgcagatcctgcatgaagcg
gggacgctggccgaagtcatctctcccttcgagctgtggctcgcgctccagctgggggtt
cccggagagcagatcgtctacaacggccccggcaagacgccggagtcactgcggcaggca
gtcgaggcggggatccggctgattcacgtcgacggcctgcatgagatcgagaccattgcc
gccgccgcccgggagttcgggaagcggccgagggtcgggcttcgcgtcgtcacctcggtc
ggctggtcggggcagttcggcctgagtctcgccgacggctcggccctcggggccttcgcc
gagatgcggcggcatccggcactcgaaccggtcgggctgcacctgcatatcggcaccggc
gtgaaggacgttgcggcgtatgcgaccgcggtcgaagaggtgcttcgctttgccggcacg
ctccagcgcaagctcggcgtgacgatcgagagcttcgacttcggcggcggcttcggcgtt
ccgacggtccggactcgatcggcctgggacgaccgcctgaaccatcacggacacccggcc
cgactggcgatcccggcagactgcccgacacccgacgactacgccgccgccctggttccg
ctgatccggaaacattgcggcgaccgggagcccgagatcctgctggagccgggccgggcg
atcacgagcagcgcccaggtgctgctcctgcgagtcctggcggtgaaagaggccggcgac
ggccgccgctcggtgatcctcgacggcggaaagaatctcacgctgccgctggagtgggag
acgcatcagatcttcccggcgagccggatgaacgagcccgaagccgccacgtgcgacctg
tatgggccgctctgccatccgggggatgttctggcgcggcacaagcggatgcccgcgccg
cgggccggggacatcctggccgtgatggatgccggggcgtacttcgttcccaaccagctc
aacttctcgcagccgcgacctgccattgtcctgattgagggccgccatgtccgttgcctc
cgcgaacgtgaacggttcgaagacatcgtccggctggacgagtgtgttcgctccgacacc
ggttcccgcgccgcctcccctgtcgtcttcccgccgggagcgacgtga
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