Planctomyces sp. SH-PL14: VT03_24725
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Entry
VT03_24725 CDS
T04354
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00550
Peptidoglycan biosynthesis
pls01100
Metabolic pathways
pls01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VT03_24725 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VT03_24725 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pls01011
]
VT03_24725 (spoVD)
Enzymes [BR:
pls01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VT03_24725 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pls01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VT03_24725 (spoVD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
TraQ
Motif
Other DBs
NCBI-ProteinID:
AMV21130
UniProt:
A0A142X3V9
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All DBs
Position
6377208..6379439
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AA seq
743 aa
AA seq
DB search
MRDAPRPTFTADPHPERWSVDAAPTARLALLFLAFLTLFSLIAARIVWIQGGARDRFLAV
WDRPVESLEPIPARDGRILSADGQVLAYDAPRFDLLIHYRWLEEPANDAWLTATARERLA
PSDRRKKAKLAAAREEVLRERVRLWQGLVDVTGRPAEELASSRQAIQTRVERMLRAVEAR
RGGAPTEPASAPLAEAPARPGLPGLWDRVVKELTTPPQRDRRDPLVIQEQLNDHILVRNV
PLPVVAAVESQGARFPGVKTHVATDRVYPHGDLAAHVLGLRQEIRPEDLAVRQERYPGGD
PLDYRAGDRIGQGGIERTYEAVLRGQRGVRRITRNRRGETLSSVIVREPRDGHDVTLTFD
LAVQLRAEQLLDGALSAGSNRVPESLPEEVNEVSSPTGGCVVAVDIRTGALLAAATAPRV
DQQLLLHPDRDSWKQIAKDPRRPLFARLTQAAVPPGSVFKVVSAVAGLQEGAIQPDEPFL
CRGFLNEPDRDRCAVYRHTGRGHGETTLGDALCWSCNVYFFDMATRLGPGPLEDWAYRFG
FGVRTGIDLPGERVGAVPNPRGGGGKWYPGTTRQLAVGQASLTVTPLQVARMMAAVANGG
TLVPLHLRQAPGDESPSAGGQGTMELVEFASGPERAAQPIEGLIPGTLERIREALRLVVE
DPQGTGRSAHLGRVAIAGKTGTAEAGGGKQDHAWFAGYAPAEEPRVAFVVFLEHGGSGGK
AAGPLVRELVRTLDDAGLLRGER
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacgctccccgacccacgttcaccgccgacccgcaccccgagcggtggtcggtc
gacgctgcgcccaccgcccgcctcgcactcctcttcctcgccttcctcacgctcttctcc
ctcatcgcggcccgcatcgtctggatccagggaggagcccgcgaccgcttcctcgctgtc
tgggaccgccccgtcgagtcgctcgaacccatccccgcccgcgacggccggatcctctcg
gccgacggccaagtcctcgcctacgacgccccacggtttgacctcctgatccactatcgc
tggctcgaagaaccggccaacgacgcctggcttacagccacagcccgtgaacgcctcgcc
ccctcggaccgccgcaagaaagcgaagctcgccgccgcccgcgaagaagtcctccgtgag
cgggtccgcctctggcaaggactcgtcgatgtcaccggccgccccgccgaagagcttgcg
agttcccgccaggcgatccagacccgcgtggagcgaatgctccgcgccgtcgaagcccgc
cgcggcggagcaccgaccgagccggcctcggctcccctcgccgaagccccggcccgaccc
ggcctgccgggcctgtgggaccgagtcgtcaaggagctgaccaccccgccgcagcgcgat
cgccgcgacccgctcgtcatccaggagcagctcaacgatcacatcctcgtccgaaacgtc
ccgctcccggtcgtcgcagcggtcgagtcccagggggcacggttccccggcgtgaagaca
cacgtcgcgaccgaccgggtctatcctcacggcgacctggcggcccacgttctcggcctg
cgtcaggagatccggccggaggacctggccgtccgccaggagcggtatcccggcggcgac
ccgctcgactatcgcgccggtgaccggatcgggcagggagggatcgagcggacctacgag
gcggtcctccgcggccagcgcggcgtgcggcggatcacacgaaaccggcgcggcgagacg
ctgtcgtcggtcatcgtccgcgaaccgcgagatgggcacgatgtcacactgaccttcgac
ctggcggttcagcttcgcgcggagcagctcctcgatggtgccctgtcggccgggtcgaac
cgcgttcccgaatcgctccccgaggaagtgaacgaggtctcgtctccaaccggcggctgt
gtcgtcgcggtcgatatccggacgggggcgcttctggccgcggcgaccgcaccccgcgtc
gatcagcaactgcttctccatccggaccgcgactcgtggaaacagatcgcaaaggatccg
cggcggcctctcttcgcgcgactgacgcaggccgccgtgccgccgggatcggtgttcaag
gtggtctccgccgtggccggactgcaggaaggggcgatccagccggacgagcccttcctc
tgccgcgggtttctgaacgagcccgaccgcgaccgctgtgccgtctatcgccacaccggc
cgcgggcatggcgagacgacgctgggcgacgccctgtgctggtcgtgcaacgtctacttc
ttcgacatggcgacgcggctcggtcccggtccgctggaggactgggcgtatcgtttcggt
ttcggcgtccggacggggatcgacctgccgggcgaacgggtcggggcggttcccaatccg
cgcggcggcggcggaaagtggtacccggggacgacacggcagctcgccgtcgggcaggct
tcgctcacggtcacgccgctgcaggtcgcccggatgatggcggccgtcgccaacggaggg
acgctggtgccgctgcatttgcgtcaggcaccgggggatgagtcgccgtccgccggaggg
cagggaacgatggaactggttgagttcgcctccggaccggagcgtgccgctcagccgatc
gaagggctcattcctggaacgctggagcggattcgcgaggcgctgcgtctggttgtcgag
gacccgcaggggacggggcggagcgcccatctcggccgggtcgccatcgcagggaagact
gggacggccgaggcgggcggcgggaagcaggatcatgcgtggttcgccggatatgccccg
gccgaggagccgcgggtggcattcgtcgtgtttctggaacatggcggctcgggggggaag
gccgcggggcccctggtgcgggagctcgtccggacgctggatgacgccgggctgctccgc
ggcgagcggtaa
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