Planctomyces sp. SH-PL14: VT03_24860
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Entry
VT03_24860 CDS
T04354
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VT03_24860 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_24860 (mutS)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VT03_24860 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AMV21157
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Position
6407192..6410005
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AA seq
937 aa
AA seq
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MSTVDPAKLTPMMQRYLEVKAETPGTILLFRMGDFYELFHEDAEIAARVLGLTLTSRDKG
SANPVPMAGFPYHALEGYLHKLIAAGHKAAICEQVEDPKTAKGMVRREVTRIVTPGTLTD
DALLDPKESNYLAAVIPMKESIGLAWMELSTGLFQCMDVGKVEAVRRKGDGKNAGRGSSA
AEPSPLGLPAAALLDELARLRPSECLVAENLRQDPTILRLSELSGMVLTHRPAWCFSATQ
CLERLLKHFQTATLEGFDVETESPGVTAAGALLDYVQETQKASAGHVVRLEPYRRGANLL
IDEATRRSLELTRTIRSNEREGSLLEAIDETSTAMGARLLADWLSNPLTDPAAIHRRLDA
VEELTRDSALCRDLREQLQQAYDLQRLCARVATLRASPRDLAALGRTLGLLPRLKAKLIG
RSSDLLRTLEVRLDLCGEIRGEIEAAIVDEAPLITSEGGMIRDGYSAPLDEFRDLARGGK
KWIAEYQAQEIQRTGIHSLKVGFNKVFGYYLEVTAAHFEKVPVDYIRKQTLKNQERFITP
ALKEYEDKVLRAEERGIALENEIFSRLRDRVNAECRRLQQTAETLAQIDVLISLATLAVQ
QRYVRPRVVSEPVLDIREGRHPVLDKILKSGAFVPNDILLGVPRGPVAPGTGAPSPRRTL
NIAAPSEPSAFSLPPSASPPPSPFIQLITGPNMAGKSTYIRQAALLTILAQMGSFIPASA
ATIGIADRIFARVGASDELGRGQSTFMVEMTEAARILNAASDRSLVILDEIGRGTSTYDG
ISLAWAITEYIHDELRCRTLFATHYHELTALPDSLPNAINWNVAVHEQGGELVFLHKIVP
GAADRSYGIHVARLAGVPRHVIARADTILHQLENDHQDVTGKTTIPQRKRTSKHKQLVLF
NPEEHPVVDEIRRLDITGWTPDQALEELQRLRNQVSK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcgatccggcgaagctgacgccgatgatgcagcggtatctcgaagtcaaa
gccgagactccgggaacgatcctcctgtttcggatgggggacttttatgagctgttccac
gaggacgcggagatcgccgcgcgcgtcctggggctgacgctgacgagccgtgacaagggc
tcggcgaacccggtcccgatggccggctttccgtaccacgctctcgaaggctacctccac
aagctcatcgccgcggggcacaaggcggcgatctgcgaacaggtcgaggaccccaagacc
gccaaggggatggtccgccgggaagtgacccggatcgtcacccccggcacgctgaccgat
gacgcgcttctcgatccgaaggagagcaactacctcgcggccgtcatcccgatgaaggaa
tcgatcggcctggcgtggatggagctctcgaccggactgttccagtgcatggatgtgggg
aaggtggaagcggttcggcggaagggcgacgggaagaatgcgggacggggatcatctgcg
gccgagccgtcgcccctcggtcttccggcggctgccctcctcgacgaactcgcgcggctg
cggccgtcggagtgccttgtcgccgagaacctgcgccaggatccgacgatcctccggctg
tccgagctgagcgggatggtcctcacccaccggccggcgtggtgcttctccgcgacgcag
tgcctggagcggctgctgaagcactttcagacggccactctcgaagggttcgacgtcgaa
accgagtcgccgggagtcacggccgccggggcgctgctcgactatgtgcaggagacccag
aaggcctccgccggtcacgtcgtgcggctggaaccgtaccgccgcggggcgaaccttctc
atcgacgaggcgacccgccgcagcctcgaactgacccggacgatccgcagcaacgagcgg
gaagggagcctgctggaggcgatcgatgagacctcgacggcgatgggggcccgccttctg
gcggactggctttccaatccgctgaccgatccggccgcgatccaccggcggctcgatgcg
gtcgaagagctgacgcgggactcggccctctgccgcgatctccgggagcagcttcagcag
gcgtacgacctccagcggctctgtgcccgcgtggcgacactccgggcctcgccccgcgat
ctggcggcgctcggccggacactcgggctcctgccgcggctgaaggcgaaactcatcggc
cgctcgtcagacctgctccggacgctcgaagtccggctcgacctgtgcggcgagatccgc
ggcgagatcgaggcggcgatcgtcgacgaagctccgctgatcacgagcgaaggggggatg
atccgcgacgggtattccgccccgctcgacgagttccgcgacctggcccgcggcggcaag
aagtggatcgccgagtaccaggcccaagagatccagcggaccgggattcacagcctcaag
gtgggcttcaacaaggtcttcggctattacctcgaagtcaccgccgcccacttcgagaag
gtcccggtcgactacatccgcaagcagacgctcaagaaccaggagcggttcatcacgccc
gctctcaaggagtacgaggacaaggtcctgcgggcggaagagcgggggatcgcccttgag
aacgagatcttctcgcgactgcgggaccgggtgaacgccgagtgccggcggctgcaacag
accgccgagacgctggcccagattgacgtcctgatttcgctggcgaccctggcggtccag
cagcggtacgtccggccccgcgtcgtgagcgagccggtcctcgatatccgtgagggccgc
cacccggtcctcgacaagatcctgaagagcggcgccttcgttccgaacgacatcctcctc
ggcgtcccccgcggaccggttgccccaggaacgggagccccttcgccgcggcgaactctc
aacatcgctgctccctcagagccttcagccttcagccttccgccttcagcctctcctcct
ccctcccccttcatccagctcatcaccggccccaacatggcggggaagagcacctacatc
cggcaggcggcgctgctgacgatcctggcccagatgggctcgttcatcccggcgagcgcg
gcgacgatcgggatcgcggaccggatctttgcccgcgtcggggcgagcgacgaacttggc
cgcggtcagagcacgttcatggtcgagatgaccgaggcggcccggattctgaacgccgcc
tcggaccgcagtcttgtgatcctcgacgagatcggccgcgggacgagcacctacgacggg
atctcgctggcgtgggcgatcacggagtacatccacgacgagctccgctgccggaccctc
ttcgcgacgcactaccacgagctcacggcgctcccggattcgctcccgaacgcgatcaac
tggaacgtcgcggtgcatgagcaggggggagagctcgtcttcctgcacaagatcgtcccc
ggggcggcggaccgcagctacgggatccacgtcgcccgcctcgccggcgttccgcggcat
gtcatcgcccgcgcggacacgatcctgcaccaactcgagaacgaccatcaggacgtcacg
gggaagaccacaatcccgcagcggaagcggacgtcgaagcataagcagctcgtcctgttc
aacccggaagagcacccggtcgtggacgagatccgccgcctcgacatcaccggctggacg
ccggatcaggcgctggaggagctgcagagactcaggaaccaagtgtcgaagtag
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