Planctomyces sp. SH-PL14: VT03_25875
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Entry
VT03_25875 CDS
T04354
Symbol
truC
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pls03009
]
VT03_25875 (truC)
Enzymes [BR:
pls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VT03_25875 (truC)
Ribosome biogenesis [BR:
pls03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT03_25875 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMV21357
LinkDB
All DBs
Position
6661511..6662209
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AA seq
232 aa
AA seq
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MAAALEILCEDGPVIAVNKPPGMVSQAGPPGIPSIVNEVKAYLARKYNKPGEVYLGVPHR
LDRPVSGVLVFSRNSKCAARLAEQFAERQVKKVYRAVVERPPEPESGELVDWLYRIPNEP
RTVIATPDTPDAREARLKYRTIARAKGRALVEVDLGTGRMHQIRIQLGSRGWPIVGDAQY
GATTSFPGTRKSDEYDVPIGLHAYQLTILHPIRYEPLTITAPLPKTWDVFGF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcactggagattctttgcgaggacgggccggtgattgccgtcaacaagccg
ccggggatggtctcgcaggcggggccaccggggattccgagcatcgtcaacgaggtgaag
gcctacctcgcccgcaagtacaacaagcccggggaggtctacctcggcgttccgcatcgt
ctggaccggccggtctccggtgtgctggtcttctcgcggaactcaaagtgtgcggcccgg
ctggcggagcagtttgccgagcggcaggtgaagaaggtgtacagggcggttgtcgagcgg
ccgccggagccggagagcggagagttagtcgactggctgtatcggattccgaatgagccc
cgcacggtcatcgcgacgcccgacactccggacgctcgggaagcgcggctgaagtaccgg
acgattgcccgggcgaaggggagggctcttgtcgaagtcgatctggggacggggcggatg
caccagatccggattcagcttgggagccggggctggccgatcgttggcgatgcgcagtac
ggggcgacgacgtcgtttccggggacgcggaagagcgatgagtacgacgtcccgatcggg
ctgcatgcgtatcagctgacgatcctgcatccgattcggtatgagccgctgacgatcacg
gcgccgttgccgaagacgtgggatgtgttcggcttctaa
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