Planctomyces sp. SH-PL14: VT03_27265
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Entry
VT03_27265 CDS
T04354
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls00220
Arginine biosynthesis
pls00240
Pyrimidine metabolism
pls00250
Alanine, aspartate and glutamate metabolism
pls01100
Metabolic pathways
pls01110
Biosynthesis of secondary metabolites
pls01240
Biosynthesis of cofactors
Module
pls_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VT03_27265 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VT03_27265 (carB)
00220 Arginine biosynthesis
VT03_27265 (carB)
Enzymes [BR:
pls01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VT03_27265 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_3
ATP-grasp_5
FGAR-AT_N
DUF384
Motif
Other DBs
NCBI-ProteinID:
AMV21633
UniProt:
A0A142X3K2
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Position
7008209..7011616
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AA seq
1135 aa
AA seq
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MPPERAAPTSLQQKPAVPRRNDIKKILIIGSGPIVIGQACEFDYSGTQACKALRDEGYEV
VLVNSNPATIMTDPGTADATYIEPITWQYVAEIIKKERPDALLPTLGGQTGLNTAMDLYR
RGILEQLGVEMIGAKADVIAKAEGRESFKQAMIKIGLDVPRSRTVHTIEEGREALREIGL
PIIIRASYTLGGTGGGIAYNKEEFEDKVRNGLALSPVSEVLLEESVLGWKEYEMEVMRDK
ADNVVIICAIENFDPMGVHTGDSITVAPAQTLTDKEYQRMRDATIAVMREIGVETGGSNV
QFAIDPKTGRMTVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETL
ACFEPTIDYVVTKIPRWTFEKFPDADPTLTVQMKSVGETMAIGRTFKESFQKALRGLEIG
QFGLGGGAKDLWGSDQQPDVAEIRNKLATPNAERVFYIRYAFKAGMSVEDVFQLTNIDPW
FLRSMWDLVATEQEIHSAGRIENLSAEQLLRYKQRGFSDKQIAWWLGSTELQVRRYRKDK
GVIATFKQVDTCAAEFEAYTPYYYSTYETEDEAPSRRKFGPEGRGLQTLDGQPVAGKEGV
TASAVNVQASTGHQRRVMILGGGPNRIGQGIEFDYCCCQASFAMRELGIESIMVNSNPET
VSTDYDTSDVLFFEPLTTEDVLNIHDRLQPDGVIVQFGGQTPLNLAKGLEAAGVPIIGTS
PAMIDVAEDREKFKELLNNLGLRQPPNGTADKVEEAIDSAQHIGYPVLVRPSFVLGGRGM
EICYDDDQVLRFMKEAVQISPDHPVLIDKFLEDAIEVDVDAISDGETTLVGGVMEHIEEA
GVHSGDSACALPPFSLPQAVIEEIKDATYKLAKALSVRGLMNIQFAVKREGSAHTVYVLE
VNPRASRTSPFVSKATNLSLARMAAKVMAGVSLKEQGITQEVWPHYTSVKESVFPFSRFQ
GVDIILGPEMRSTGEVMGIDMEFPAAFAKSQLAAGVKIPTEGTVFISMAKNHKEAIVEPA
RRLRELGFKILSTAGTAKVLQQAGIEVETVRKLQEGRPNLLDHMANGQVQIIFNTPSGKG
ARSDEGRIRASAVIQGVPCVTTLPGCHAMVKAIEYQIAHPQPQVQALQTWAKSLK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
gtgccaccggagcgggcggcccccaccagcctccagcagaagcctgccgtgccccgtcgc
aacgacatcaagaagattctcatcatcggctccggcccgatcgtcatcggtcaggcatgc
gagttcgattactccggcacacaggcctgcaaggccctgcgcgatgagggctacgaggtc
gtcctggtcaactcgaacccggcgacgatcatgaccgacccggggacggccgatgcgacc
tacatcgagccgatcacctggcagtacgtcgccgagatcatcaagaaggagcggcccgac
gccctcctgccgacgctcggcggccagaccggcctcaacacggcgatggacctctaccgc
cgcgggattctggagcagctgggcgtcgagatgatcggggccaaggcggacgtcatcgcc
aaggcggaagggcgggagtccttcaagcaggcgatgatcaaaatcggcctggacgtcccc
cgctcgcggacggtccatacgatcgaagaaggccgcgaagccctgcgggaaatcggcctc
ccgatcatcatccgcgccagctacacgctcggcgggaccggcggcgggatcgcctacaac
aaagaagagttcgaagacaaggtccgcaacggcctggcgctctcccccgtcagcgaagtg
ctcctcgaggaatcggtcctcggctggaaggagtacgagatggaggtgatgcgggacaag
gcggacaacgtcgtcatcatctgtgcgatcgagaacttcgacccgatgggggtccacacc
ggggactcgatcaccgtcgcgccggcccagacgctgacggacaaggaataccagcggatg
cgggacgcgacgatcgcggtcatgcgcgagatcggtgtcgagaccgggggttcgaacgtc
cagttcgcgatcgatcccaagacggggcggatgacggtcatcgagatgaacccccgcgtc
agccgctcgagcgccctggcctcgaaggcgaccggcttcccgatcgccaagatcgccgcc
aagctggcggtcggctatacgctcgacgaaatcccgaacgacatcacgcgggagacgctc
gcctgcttcgagccgacgatcgactacgtcgtcaccaagatcccgcggtggaccttcgaa
aagttcccggacgccgacccgaccctgacggtccagatgaagtcggtcggggagacgatg
gcaatcggccggaccttcaaggagtcgttccagaaggcgctccgtggtctcgagatcggc
cagttcggcctcggcggcggggccaaggacctgtgggggagcgaccagcagccggacgtc
gcggagatccgcaacaagctcgccacgccgaatgccgaacgggtgttctacatccgctat
gcgttcaaggcggggatgagtgtggaggatgtcttccagctcacgaacatcgacccgtgg
ttcctgcggagcatgtgggatctcgtggcgacggagcaggagattcactccgccggccgg
atcgagaatctctcggccgagcaactcctccgttacaaacagcggggcttctccgacaag
cagatcgcgtggtggctcggctcgacggagctgcaggttcgccgctaccgcaaggacaag
ggggtcatcgcgaccttcaagcaggtcgatacctgcgccgcggagttcgaagcctacacc
ccgtactactactcgacctacgagaccgaggacgaggcacccagccgccggaaattcggc
cccgagggacgcgggctccagacgctcgacggccagccggtcgccggaaaagaaggcgtg
accgcgtcggcggtcaatgtccaggcgtcgaccggccaccagcggcgggtcatgatcctc
ggcggcgggccgaaccggatcgggcaggggatcgagtttgactactgctgttgccaggcg
tcgttcgccatgcgggagctcggcatcgagtcgatcatggtcaactcgaatcccgagacc
gtctcgaccgattacgacacctcggacgtcctgttcttcgagccgctgacgaccgaagac
gtcctcaacatccacgaccgtctccagccggacggcgtcatcgtccagttcggcggccag
acgccgctgaacctcgccaaggggctcgaagcggcgggcgtcccgatcatcggcacgagc
ccggcgatgatcgacgtcgccgaagaccgcgagaaattcaaggagctgctgaacaacctc
ggcctccggcagcccccgaacgggaccgccgacaaggtcgaagaggcgatcgattccgcc
cagcacatcggctatccagtgttggtccgcccgagcttcgtcctcggcggccgcggcatg
gagatctgctacgacgatgaccaggtcctccgcttcatgaaagaagcggtccagatctcg
ccggaccacccggtcctgatcgacaagttcctggaggacgcgatcgaggtcgacgtcgac
gccatctcggacggcgagacgaccctcgtcggcggggtcatggagcatatcgaagaggcg
ggcgtccacagcggcgactcggcctgcgccctgccgccgttttcgcttccccaggcggtg
atcgaggagatcaaggacgcgacctacaagctggccaaggcgctcagcgtccgcggcctg
atgaatatccagttcgcggtgaagcgggaaggttcggcccacaccgtctacgtcctggaa
gtgaatccgcgggcctcacggacctcgccgttcgtctccaaggcgacgaatctgtcgctg
gcccggatggccgccaaggtgatggccggggtgagcctgaaagagcaggggatcacccag
gaggtctggccgcactacacctcggtcaaggagagcgtcttcccgttctcccggttccag
ggggtggacatcatcctcggccccgagatgcggagcaccggcgaggtgatggggatcgat
atggagttccctgcggccttcgccaagagccagcttgccgccggggtgaagatcccgacg
gaagggaccgtcttcatcagcatggcgaagaaccacaaggaagcgatcgtcgagcccgcc
cgccgcctgcgggagctgggcttcaagatcctcagcaccgctggaaccgccaaggtcctc
cagcaggcggggatcgaggtcgaaaccgtccgcaagcttcaggagggccgtccgaacctc
ctcgaccacatggcgaacggccaggtccagatcatcttcaacacgccgagtggcaaggga
gcccgcagcgacgaaggccgcatccgcgccagcgccgtgatccagggggttccctgcgtg
acgacgctccccggctgccacgcgatggtcaaggcgatcgagtaccagatcgcccacccg
cagccgcaggtgcaggccctccagacgtgggccaagtcgctgaagtag
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