Planctomyces sp. SH-PL14: VT03_27405
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Entry
VT03_27405 CDS
T04354
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pls03032
]
VT03_27405 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
pls03400
]
VT03_27405 (gyrA_1)
Enzymes [BR:
pls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VT03_27405 (gyrA_1)
DNA replication proteins [BR:
pls03032
]
Prokaryotic type
DNA Topoisomerases
VT03_27405 (gyrA_1)
DNA repair and recombination proteins [BR:
pls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VT03_27405 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
AMV21661
UniProt:
A0A142X451
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All DBs
Position
7041009..7043783
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AA seq
924 aa
AA seq
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MADQDENLSGEAFQPGQNGAGNGGSDQGIERMDIRQEMQQSYLTYAMSVIVSRALPDARD
GLKPAQRRILVAMNDLNLGPSGGRIKCAKISGDTSGNYHPHGEAVIYPTLVRMAQDWVMR
ATLVDKQGNFGSIAGLGPAAMRYTEARLSQAAAEMLDDLGRDTVDFIPTYDQRGTEPVVL
PSRFPNLLVNGSTGIAVGMATSIPPHNLAEVASAVQVLIDNPEATFDDIMEVLPGPDFPT
GGVICGRYGVRQGYLTGRSTLTVRAKVDFETEKNTEVIVVKEIPYLETRDRIKEKLEELI
KEDKIKGISKVVDYTDRKTPTWQVRLHIYLKRDADREVVLNLLYKYSPLQTTVSVILLAL
VGNRPQTLNIRDLLQEFIRHRVTVIRRRTEFLLSEARRRKHTVEGMLIAQIDIDQIIDTI
RRSPSRSEAKVRLQAIKMPAELVQRALGDEGFRLFQEEQGTAETYSLSINQTEAIVSMQL
GSLANLERENLQGEHRKLLENIIEYLRLLSSEANILVEVRKEMDNLKENFADKRRTEISE
DELTDVNKDDLIPEEPMVVTLSQRGYVKRTQLSVYQAQNRGGKGIAGAKADEEDPTEHMF
VSSTHAWLLFLTNTGRVFKQKVYDLPLQGRTAKGRALVNLLTLGEGETVQDCIDVRAFTE
DEYLLMVTKDGTIKKTSLDKFANIRAGGIVAIKLEEGDALIDVVKVQPGQDIVLSTAGGM
AIRFCETDARAMGRDTMGVRGIKLGKGDTVVGLTVAEEDATLLTICENGYGKRTPFGVVS
PDEAEGESDEAAATAAEEPASDEEAGEEGSGESSGMRYRRQRRGGKGLRDIKATTRNGPV
MGTLAVHDGDDVLMVSQYGMMQRIRAKDISVIGRNTQGVRIMKLDKDDKLVSIARIPAEV
ADETTSPSPAAPPVGDAGEPSSEA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
ttggcagatcaggacgagaacctgtccggtgaggcgtttcagcccggacagaacggcgcc
ggaaacggtgggagcgaccagggcatcgagcggatggacatccgccaggagatgcagcag
agctacctgacatacgccatgagcgtcattgtcagccgcgctctcccggacgcccgcgac
ggcctcaagccggcccagcgccgcatcctcgtcgccatgaacgacctgaatctcggcccg
agcgggggccggatcaagtgcgccaaaatctccggcgacacctcggggaactaccacccc
cacggtgaagcggtcatctacccgaccctcgtccgcatggcccaggactgggtgatgcgg
gccaccctggtcgacaagcaggggaacttcggttcaatcgccggtctcggccccgcggcg
atgcggtataccgaggcccgcctctcgcaggccgccgccgagatgctcgacgacctcggc
cgggacacggtcgacttcatcccgacctacgaccagcgggggaccgagccggtcgttctg
ccgtcgcggttcccgaacctcctcgtcaacgggtcgaccgggatcgcggtcgggatggcg
accagcatcccgccgcacaacctcgccgaagtggcgagcgcggtgcaggtcctgatcgac
aaccccgaggcgaccttcgacgacatcatggaggtcctccccggtccggacttcccgacc
ggcggcgtcatctgcggccgctacggcgtccggcagggctacctgaccggccggagcacg
ctgacggtccgggccaaggtcgacttcgagaccgagaagaacaccgaagtcatcgtggtg
aaggagattccgtacctcgagacccgcgaccggatcaaggagaagctcgaggagctgatc
aaggaagacaagatcaaggggatctcgaaggtcgtcgactacaccgaccgcaagaccccg
acgtggcaggtccgcctgcacatctacctgaagcgggacgccgaccgcgaagtcgtcctc
aacctgctctacaagtattcgccgctgcagaccacggtcagcgtgatcctgctggccctc
gttggcaaccggccgcagacgctcaacatccgggacctgctccaggagttcatccggcac
cgcgttacggtcatccgccggcggaccgagttcctcctctccgaagcccgccgccgcaag
cacacggtggaggggatgttgatcgcccagatcgacatcgaccagatcatcgacacgatc
cgccgctcccccagccggtccgaggccaaggtccgcctgcaggcgatcaagatgcccgcc
gaactcgtccagagggccctcggcgacgaagggttccgcctgttccaggaagagcagggg
accgccgagacctattcgctctccatcaaccagacggaagcgatcgtcagcatgcaactc
ggttcgctggcgaaccttgagcgggagaacctgcagggagagcatcgcaagctcctcgaa
aacatcatcgagtacctgcggctcctctccagcgaggccaacatccttgtggaagtccgc
aaggagatggacaacctcaaggagaatttcgccgacaagcggcggaccgagatctccgaa
gacgaactgaccgacgtcaacaaggacgacctgatccccgaagagccgatggtggtcacg
ctctcgcagcggggctacgtcaagcggacgcagctcagcgtctatcaggcgcagaatcgc
ggcgggaaggggatcgccggtgccaaggcggacgaggaagatccgaccgagcacatgttc
gtctccagcacgcacgcgtggctgctcttcctgacgaacaccggacgcgtcttcaagcag
aaggtctacgacctgccgcttcaggggcggacggcgaaggggcgagccctcgtcaacctg
ctcacgctgggcgagggagagaccgtccaggactgcatcgacgtccgcgccttcacggag
gacgagtacctcctgatggtgacgaaggacgggaccatcaagaagacctccctcgacaag
ttcgccaacatccgcgccggtggaatcgtggcgatcaaacttgaagaaggggacgctctg
atcgacgtcgtgaaagtccagccggggcaggacatcgtcctcagcacggcgggcgggatg
gcgatccgcttctgcgagactgacgcccgggcgatgggccgcgacacgatgggggtccgc
gggatcaagctcggcaagggggacacggtcgtcggcctcaccgtcgccgaagaggatgcg
acgctcctgacgatctgcgagaacggctacggcaagcggaccccgttcggcgtcgtctcg
cccgatgaggcggaaggggagagcgacgaagccgcggccactgcggccgaggaaccggcg
tccgatgaagaggctggcgaagagggctcgggcgagtcgagcggtatgcggtatcgccgg
cagcgccggggcggcaaggggctgcgggacatcaaggcgacgacccgtaacggcccggtc
atggggacgctggcggtccatgacggcgacgatgtcctgatggtctcccagtacgggatg
atgcagcggatccgggcgaaggacatcagcgtcatcggccgcaacacccagggtgtgcgg
atcatgaaactggataaggacgacaagctcgtcagcattgcccggatcccggcggaagtc
gccgacgagacgacgtctccgtcccccgccgctccgccggtgggtgatgcgggagagccg
tcgtccgaggcgtga
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