Planctomyces sp. SH-PL14: VT03_29695
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Entry
VT03_29695 CDS
T04354
Symbol
groL5
Name
(GenBank) 60 kDa chaperonin 5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT03_29695 (groL5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pls03019
]
VT03_29695 (groL5)
03110 Chaperones and folding catalysts [BR:
pls03110
]
VT03_29695 (groL5)
03029 Mitochondrial biogenesis [BR:
pls03029
]
VT03_29695 (groL5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pls04147
]
VT03_29695 (groL5)
Enzymes [BR:
pls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VT03_29695 (groL5)
Messenger RNA biogenesis [BR:
pls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VT03_29695 (groL5)
Chaperones and folding catalysts [BR:
pls03110
]
Heat shock proteins
HSP60 / Chaperonin
VT03_29695 (groL5)
Mitochondrial biogenesis [BR:
pls03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VT03_29695 (groL5)
Exosome [BR:
pls04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VT03_29695 (groL5)
Exosomal proteins of other body fluids (saliva and urine)
VT03_29695 (groL5)
Exosomal proteins of breast cancer cells
VT03_29695 (groL5)
Exosomal proteins of colorectal cancer cells
VT03_29695 (groL5)
Exosomal proteins of bladder cancer cells
VT03_29695 (groL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
AMV22114
LinkDB
All DBs
Position
7600902..7602608
Genome browser
AA seq
568 aa
AA seq
DB search
MAKLLSFDEDARKQLLEGVSKLARAVASTLGPRGRNAVLDKGWGAPKVTKDGVTVAQDIE
LECKFENCGVQLVKEAASKTGDTAGDGTTTATVLAEAIYREGLKYIAAGAAPVALSRGIQ
KAVDAVVENLKKIAKPIQANDRKAIEMVAAIAGNNDPEIGKILADALLKVGKDGVITIEE
GRQTQTEIELVEGMQFERGYLSPHFVTNEDDQVVELDNVRILIHEEKISNARTLVPVLEQ
VSKDGVPLLIIAEDVEGEALATLVVNKLRGIVKVCAVKAPGYGDRRKAMLEDLAILTGGR
AFFKDLGEKLENIKLSDLGKAKKVRIDSENTTVVQGGGKKEAIEGRAAQIRSEITKTDSE
YDREKLQERLAKLAGGVAQINVGAATETEMKERKDLIDDALHATRAAVEEGIVPGGGVAL
LRSGEALKKVKLEGDEALGVQLIKNVLEMPLRKIAENAGLDGSVVANTVRKNSDVNYGFD
ALNEKYGDMLSFGVVDPAKVVRSALQNGASVAALLLTTDSIIVDEPKKDEKDGHHDHHDH
GGGGMGGMGGMGGMGGMGMGGMGGMGGF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaattgctgagttttgacgaagacgctcgcaagcagcttctggaaggcgtttcc
aagctggctcgggccgtcgcctcgacgctgggcccccgcgggcggaatgctgttctggac
aagggatggggcgcccccaaggtgaccaaggacggcgtgaccgtcgcccaggacatcgaa
ctcgaatgcaagttcgagaactgcggcgtccagctcgtgaaggaagccgcctccaagacg
ggtgacaccgccggcgacggcaccacgaccgccaccgtcctcgccgaagcgatctaccgc
gaaggcctcaagtacatcgccgccggagccgctccggtcgccctgagccgcggcatccag
aaggcggtcgacgccgtcgtcgagaacctgaagaagatcgccaagccgatccaggccaac
gaccgcaaggcgatcgaaatggtcgcggcgatcgccggcaacaacgatcccgagatcggc
aagatcctcgccgacgccctcctcaaggtgggcaaggacggcgtgatcacgatcgaagaa
ggccgccagacccagaccgagatcgaactcgtcgaagggatgcagttcgagcggggctac
ctctccccgcacttcgtcacgaacgaagacgatcaggtcgtcgagctggacaacgtccgc
atcctcatccacgaagagaagatctcgaacgcccggaccctcgtgccggtcctcgagcag
gtctcgaaggacggggttcccctcctgatcatcgctgaagacgttgaaggggaagctctc
gcgactctcgtcgtcaacaagctccgcggcatcgtcaaggtgtgtgcggtcaaggccccg
ggctacggcgaccgccgcaaggcgatgctcgaagacctggcgatcctgaccggcggccgg
gccttcttcaaggacctcggcgagaagctcgagaacatcaagctctccgacctcggcaag
gccaagaaggtccggatcgactccgagaacacgaccgtcgttcagggaggcggcaagaag
gaagcgatcgaaggccgcgcggcccagatccgctccgagatcaccaagaccgacagcgaa
tacgaccgcgagaagctccaggagcggctcgccaagctcgccggcggcgtggcccagatc
aacgtcggtgccgccactgaaacggaaatgaaggaacgtaaggacctcatcgacgacgcc
ctgcacgcgacccgtgccgccgttgaagaagggatcgttccggggggcggggtcgccctg
ctccgctcgggcgaagccctcaagaaggtgaagctcgaaggggacgaagctctcggcgtt
cagctcatcaagaacgtcctcgagatgcccctccgcaagatcgccgagaacgccggtctc
gacggctcggtcgtcgccaacaccgtccgcaagaacagcgacgtcaactacggcttcgac
gctctcaacgagaagtatggcgacatgctctccttcggcgtcgtcgacccggccaaggtc
gtccgctcggctctccagaacggagccagcgtcgcggccctgctgctgacgacggactcg
atcatcgtcgatgagcccaagaaggacgagaaggacggccaccacgatcaccatgaccac
ggaggcggtggcatgggaggaatgggtggtatgggaggcatgggcggaatgggaatgggt
ggcatgggagggatgggaggcttctag
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