Planctomyces sp. SH-PL14: VT03_30135
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Entry
VT03_30135 CDS
T04354
Symbol
fliA_2
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls02020
Two-component system
pls02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VT03_30135 (fliA_2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VT03_30135 (fliA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pls03021
]
VT03_30135 (fliA_2)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pls02035
]
VT03_30135 (fliA_2)
Transcription machinery [BR:
pls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VT03_30135 (fliA_2)
Bacterial motility proteins [BR:
pls02035
]
Flagellar system
Flagellar assembly proteins
Stator
VT03_30135 (fliA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
PCI
Motif
Other DBs
NCBI-ProteinID:
AMV22202
LinkDB
All DBs
Position
7727542..7728315
Genome browser
AA seq
257 aa
AA seq
DB search
MATDTTTDIHQVWLEYRQNPTEDLRNRLIERFFPLVRFNAERVWQKLPDGVDINDLISAG
VFGLMDAIDAFDLDRGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKASKLEHARKEIE
ASTGRPPTDPELADKMQMPLDEFQKMKSEASAVALVSLNKKWYETDSYKDVREIDIIEDT
KGEDPTNGIQKKDLMKLVTKGLNRNERLIIILYYYEELTMKEIGQTLGLSESRVSQMHSS
IVSRLKDQLRKRRPEFA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacacaacgacggacatccatcaggtctggctggagtaccgccagaatccg
acggaagaccttcgcaaccgtctcattgaacgattctttcccctggtccgcttcaacgcg
gagcgggtctggcagaagctgcccgacggagtggatatcaatgacctgatctctgccggc
gtgttcggactgatggacgccatcgacgctttcgacctcgaccgcggggtcaagttcgag
acgtactgcgtcccccggatccgcggggcgatgctcgacgagctccgcacgatggactgg
gtgccgcgcctcgtccgcagcaaggcgagcaagctggagcacgcccgcaaggaaatcgaa
gcctcgaccggccgtccgcccacggacccggaactggccgacaagatgcagatgccgctg
gacgagttccagaagatgaagtccgaggcgagcgccgtcgcgctggtcagtctcaacaag
aagtggtacgagaccgacagctataaagacgtccgcgagatcgacatcatcgaggacacc
aagggcgaagacccgacgaacgggatccagaagaaggatctcatgaagctcgtcaccaag
ggtctcaaccgcaacgagcggctcatcatcatcctctactactatgaggaactgacgatg
aaggagatcggccagaccctgggcctctccgagtcccgcgtgagccagatgcattcgagc
atcgtgtcgcgtctgaaggaccagctccggaagcggcgccccgagttcgcgtag
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