Planctomyces sp. SH-PL14: VT03_30300
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Entry
VT03_30300 CDS
T04354
Name
(GenBank) bifunctional preprotein translocase subunit SecD/SecF
KO
K12257
SecD/SecF fusion protein
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls02024
Quorum sensing
pls03060
Protein export
pls03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VT03_30300
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VT03_30300
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VT03_30300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pls02044
]
VT03_30300
Secretion system [BR:
pls02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VT03_30300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
MMPL
Sterol-sensing
EMC1_C
Motif
Other DBs
NCBI-ProteinID:
AMV22235
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All DBs
Position
7762734..7765709
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AA seq
991 aa
AA seq
DB search
MNSLGNLVLLAQDQAMTAGAAANEAAPAAGGYDWKLIALLVGTFVLPVILAQLIARGLRL
KEYAGRIGVVLFVLFLSLVPFLSQIANGQSVYDAVTWGIDLAGGTNMVFEVDEAAARATG
KPVTAEVMTQMEGAVKTRINPSGVEEVTVRKVGQNRIEIIVPGADTEKAQQIKERIVNLG
ELEFDLVANNLEFDSIIKLAQEEANKDKSELYENGKLVAKWRRSAKSKKTGEWMVDAGGG
AYENGVVRERDVNGQKVREILVINEPDPRRRITGELLSQASGGIGETGPNVHFRFNSRGG
TLFSQLTSSHLPREGTNFRTRLAILLNDELYSAPTINSVISDSGEITGSFTQEEVDELVS
VLNAGALQVPLKKQPVNEYTVSPLLGVDIQQKGLRAIGLSVIGVILVTAGYYLWPGVIAD
ISLILNLIILLGAMAVIDATFTLPGLAGIALTLGMAIDANVLIYERMREEQAKGASFRMS
IKNGFDKALPTILDSNLTTMITAVVLYYIGTDQVKGFAVTLFVGLAISMFCAVYVGRLIF
DIAEKKKWLTELKMMNLVPSKNFDFVGKRFFFIGLSVTVMILGLLVIAYRGRDNMDIDFR
GGSMVTFQFAGDTQPTVDAVLDTVQPKFEDPVSLEKLTIPAKGTQKARELFRLRTLVDNP
IKTRDALRDAFATGDNKLILQSFSAGEIKPIAPLKEGETPTEANRYAGGREVEFTVSQPL
SASTLNGEADAVFDGISAERYGKADTFVVVNPVGSDTEPVKKLVLRATPDVPEADFKAAS
EALVQRLDKQPVFEELNTFAAQVATDTQVSALLAIFFSLLATTIYLWIRFNGVTFGLAAS
IACFHDVLITLGIMAAVSYLGLTSFGQSIGLLDFKVNLTIVAAVLTVIGYSLNDTIVVFD
RIREVRGKSPTVTYEMVNRSLNETLPRTLLTSSTTLLVLVVLYLIGGESVRGFSLCLILG
IVIGTYSSIYVASPVLVWIMSRNSGKKPLMS
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaactccctgggtaacctggttcttctcgctcaagatcaggccatgacggccggcgcc
gccgcgaacgaggccgctcctgcggcgggcggatacgactggaaactgatcgccctcctg
gtcggcacgttcgtcctgccggtcatcctcgcgcagctcatcgctcggggcctccgcctc
aaggagtatgccgggcggatcggcgtggtcctgttcgtcctgttcctctcgctggtgccg
ttcctctcccagatcgccaacggccagtcggtctacgacgccgtgacgtgggggatcgac
ctcgccggcggaacgaacatggtgttcgaagtcgacgaggccgcggcccgggcgaccggc
aagccggtgacggccgaggtcatgacccagatggaaggggcggtcaagacccgcatcaac
ccgtccggggtcgaggaagtgacggtccgcaaggtgggccagaaccggatcgagatcatc
gttccgggggccgacaccgagaaggctcagcagatcaaggagcggatcgtcaacctcggg
gagctcgagttcgatctcgtcgccaacaacctcgagttcgactcgatcatcaaactcgct
caggaagaagccaacaaggacaagagcgagctctacgaaaacgggaagctcgttgccaag
tggcgtcggtcggccaagtccaagaagaccggcgagtggatggtcgacgccgggggcggc
gcctacgaaaacggcgtcgtgcgggagcgggacgtcaacggccagaaggtccgtgaaatc
ctcgtgatcaacgagccggacccccggcggcggatcaccggcgaactcctgtcgcaggcc
tccggagggatcggcgagacgggaccgaacgtgcacttccgcttcaattcgcggggcggg
accctgttcagccagctcacctcgtcccaccttccgcgggaagggacgaacttccggacg
cgcctggcgatcctgctgaacgacgaactctattcggccccgacgatcaactcggtcatt
tcggactcgggggagatcaccgggagcttcactcaggaagaagtcgacgagctcgtctcg
gtcctgaatgccggggccctgcaggttccgctcaagaagcagccggtcaacgaatacacg
gtcagcccgctcctgggggtcgacatccagcagaaggggctccgcgcgatcgggctgtcg
gtcatcggggtcatcctcgtcaccgccggctactacctctggccgggggtgatcgccgac
atctcgctgatcctgaacctcatcatcctcctgggggcgatggcggtcatcgacgccacc
ttcaccctcccgggcctcgcggggatcgccctgaccctggggatggcgatcgacgccaac
gtgctgatttacgagcgtatgcgtgaagagcaggccaagggggccagcttccgcatgagc
atcaagaacggcttcgacaaggccctgccgacgattctcgactcgaacctgaccacgatg
atcacggcagtcgtgctgtactacatcggaacggaccaggtgaaaggcttcgcggtcacg
ctgttcgtcggtctggcgatcagcatgttctgcgcggtctacgtcggccggctgatcttc
gacatcgccgagaagaagaagtggctcaccgagctcaagatgatgaaccttgtcccgtcg
aagaacttcgacttcgtgggcaagcggttcttcttcatcggtctctccgtcacggtcatg
atcctggggctcctggtgatcgcgtaccgcggccgggacaacatggacatcgacttccgc
ggcggatcgatggtgacgttccagttcgccggggacacgcagccgacggtggacgccgtg
ctggacaccgtgcagcccaagtttgaagacccggtctcgctggagaagctgacgattccc
gccaaggggacccagaaggcacgggagctgttccgtctgcggacgctggtggacaatccg
atcaagacccgcgacgcgctgcgggacgctttcgccaccggcgacaacaagctgattctc
cagagcttcagcgccggcgagatcaagccgatcgcgccgctcaaggaaggcgagactccg
accgaggcgaaccggtacgccggcggccgcgaagtcgagttcacggtgtcgcagcccctc
tcggcctcgacgctcaacggcgaggcggacgccgtgttcgacggcatcagcgcggagcgt
tacggcaaggcggacacgttcgtcgtcgtgaatccggtggggagcgacaccgagccggtc
aagaagctcgtcctccgcgccactccggacgtccccgaagccgatttcaaggccgcctcg
gaggcgctggtccagcgtctcgacaagcagccggtcttcgaggaactcaacacctttgcg
gctcaggtggcgaccgacacgcaggtctcggccctgctggcgatcttcttcagcctcctg
gcgacgacgatctacctgtggatccggttcaacggcgtgacgttcgggctggcggcctcg
atcgcctgtttccacgacgtcctgattacgctggggatcatggcggcggtctcgtacctc
ggcctgacctcgttcggccagtcgatcggtctcctggacttcaaggtcaacctgacgatc
gtcgccgccgtgctgacggtcatcggttactcgctgaacgacacgatcgtcgtgttcgac
cggatccgcgaggtccggggcaagagcccgacggtgacctacgagatggtcaaccgcagc
ctgaacgaaacgctcccccggacgttgctgacgtcgtcgacgacgctgctcgtgctcgtg
gtgctgtacctgatcggcggcgaaagcgtccgcgggttctcgctctgcctgatcctgggg
atcgtgatcggaacgtacagctcgatctacgtcgccagccccgtgctggtgtggatcatg
agccgcaattcgggcaagaagccgctgatgtcgtag
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