Planctomyces sp. SH-PL14: VT03_32530
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Entry
VT03_32530 CDS
T04354
Symbol
sigA_4
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VT03_32530 (sigA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pls03021
]
VT03_32530 (sigA_4)
Transcription machinery [BR:
pls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VT03_32530 (sigA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
DUF6285
KORA
Motif
Other DBs
NCBI-ProteinID:
AMV22666
LinkDB
All DBs
Position
complement(8302023..8302868)
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AA seq
281 aa
AA seq
DB search
MTTKTTTRRPSATVQNPLETYLREINETALLTADDEKELAYRIAEGDMSARDRMVRANLR
LVVNIARGYGNKGLPLQDLIEEGNLGLLRAVEGFDPTMNTRFSTYASYWIKQSIKRAIIN
SGKTIRIPAYMVEVLTKWRRATARLQDQLGRTPTLEEVAKFMELPARKLRIVKKAIQLYN
STPQQEQADDNWSMGEVVPDERSKGPEDELVDGDSLKHVRVMLAGMEDREATILRMRFGL
DDGEPRTLKEIGESLGLTRERVRQIECEALARLNKGLTGDR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaaaaccacgacgcgccgcccgtcggccaccgtgcagaatcctctcgagacg
tacctgcgagagatcaacgaaacggcgctactgaccgccgatgacgaaaaggaactcgcc
taccggattgccgaaggggacatgtcggcccgcgaccggatggtccgggccaacctccgc
ctcgtcgtcaatatcgcccgcgggtatggcaacaaggggctccccctgcaggacctcatc
gaagaggggaacctggggctgctccgcgccgtcgaggggttcgaccccacgatgaacacg
cggttcagcacctacgccagctactggatcaagcagtcgatcaagcgggcgatcatcaac
agcggcaagacgatccgcatcccggcctacatggttgaggtgctgaccaagtggcggcgg
gcgaccgcccggctgcaggaccagctcggccgcacgccgacgctggaagaggtcgccaag
ttcatggagctgccggcccgcaagctgcggatcgtcaagaaggcgattcagctttacaac
tcgactcctcagcaggagcaggcggacgacaactggtcgatgggcgaagtcgttcccgac
gagcggtccaagggccccgaggacgagctggttgatggcgacagcctcaagcatgtccgg
gtaatgctggccgggatggaagaccgggaagcgacgatcctgcggatgcggttcggtctc
gacgatggcgagccccgcacgctgaaggagatcggcgagtccctcggtttgacccgggag
cgggtccgccagatcgagtgcgaggcgctggcccgcctcaacaagggtctgacgggcgac
cgctga
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