Planctomyces sp. SH-PL14: VT03_32550
Help
Entry
VT03_32550 CDS
T04354
Symbol
rimK
Name
(GenBank) Ribosomal protein S6 modification protein
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pls03009
]
VT03_32550 (rimK)
Ribosome biogenesis [BR:
pls03009
]
Prokaryotic type
ribosomal protein modification factors
VT03_32550 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
GSH-S_ATP
Rimk_N
ATPgrasp_ST
ATP-grasp_3
ATPgrasp_YheCD
R2K_3
GSH-S_N
ATP-grasp
CPSase_L_D2
Dala_Dala_lig_C
ATP-grasp_5
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
AMV22670
UniProt:
A0A142X8A3
LinkDB
All DBs
Position
complement(8309543..8310418)
Genome browser
AA seq
291 aa
AA seq
DB search
MRIVVLGNEGSWYVADLQRAARERGHVCERIDYGALVAEASTARNTVLSGDEDLAAWDAV
VIRTMPPGSLEQVVFRMDALHRLHESGVQVLNSPRAIECAVDKYLTTARLARDGLPVPAT
IACEGFDQAMAAFERLGGDVVVKPLFGAEGRGIVRVSDPDIAHRVFRTLERIGAVLYLQQ
FIRHPGWDLRLLLLDGRPLGAIRRSNPTDFRTNISREGHAEVHTPDDREVEYAIRAAEST
QTRFAGVDLLYGPDGTLYVIEVNAVPGWRGFQKATGLDVAERVVSSIESSS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgtggtgctcggcaacgaggggagctggtacgtcgcggacctgcagcgcgcc
gcccgcgagcgcggacacgtctgcgaacggatcgactacggcgcgctcgtcgcggaagcg
tcgaccgctcgaaacaccgtcctgagcggcgacgaggatctggcggcgtgggacgccgtc
gtgatccggacgatgccgccggggtcgctcgagcaggtcgtcttccgcatggacgcgctg
catcgactccacgaatcgggcgtgcaggtcctgaactccccgcgggcgatcgagtgcgcc
gtcgacaagtacctgacgacggcgcggctggcccgcgacggccttcccgtccccgcgacc
atcgcctgtgaagggttcgatcaggcgatggccgcctttgagcggctcggcggagacgtc
gtcgtcaagccgctgttcggggcggaagggcgggggatcgtgcgggtctccgatcccgat
atcgcccatcgcgtcttccggaccctggagcggatcggcgcggtcctctatctccagcag
ttcatccggcatcccggctgggacctgcggctcctcctcctcgacggccgcccgctcggc
gccatcagacgttcgaaccccacggacttccgaacgaacatctcccgcgaagggcacgcc
gaagtccacacgcccgacgatcgggaagtcgagtacgcgatccgcgccgcggagagcacc
cagacccggttcgccggtgtcgatcttctctacggcccggacggcacgctctacgtgatc
gaagtcaacgccgtccccggctggcgcgggtttcagaaggcgacgggcctcgatgtcgcg
gagcgagtcgtgagctcgatcgagagttcgtcgtga
DBGET
integrated database retrieval system
