Pelodictyon luteolum: Plut_0997
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Entry
Plut_0997 CDS
T00291
Name
(GenBank) Exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
plt
Pelodictyon luteolum
Pathway
plt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Plut_0997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plt03400
]
Plut_0997
Enzymes [BR:
plt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Plut_0997
DNA repair and recombination proteins [BR:
plt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Plut_0997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABB23859
UniProt:
Q3B472
LinkDB
All DBs
Position
1129313..1132924
Genome browser
AA seq
1203 aa
AA seq
DB search
MMRALEHASVPLSGMNLIEASAGTGKTHAIGSLYLRLVVEESLLPDSILVVTYTEAASGE
LRGRIRDRIRDTLHALRDPQCSQQALLEIGSAAVAVGVEEAARRLEGALGSFDTAAVHTI
HAFCLRALQDHAFESGSLYDTALGADQHELLQGIVEDFWRQRFFSPESPLSGYIGWKKDV
TPESFTRLLSSLRPGPFTCIRPDYPPEEPAAAEARCTEAYRAAAGMWKQERALIVSILND
DAGLSRAAGAYKKEELILLFERMDAYLESGSVFDCFTGFERFTSASLRANMKKKYEAPVH
RFFDAAEALLRELDLRLLVLKSELVRYYRSVLPRRKEELNVRLFDDLLTDLYLALEAEGG
GRLGEVLRSSYPAALIDEFQDTDPVQYEIFRMIYAGSDLPLFLIGDPKQAIYSFRGADLF
AYLKAAASVDGDCRFTLEKNWRSAPLLLEGFNTLFLKGPNPFLYPGIAYRPVSSGGGGPR
DPFTHEDDRHPEPLQLWLLDARDAKNGCLTVEAAEEMAAAAVAGEIVRLLGDARAGKARI
GDVPLAASDMAVIVRTHLQAAKVHAALRARGVPAVMQSDRSVFLSPVAGEVLLLLEALLH
PSSEGRIRSALVTTILGRTGNVIAALSADGEEWIACLRDFAQWNQLWRTQGFMAMTRAFM
RKEGVRRRVLAREGGQRTLTDILHCFELLHQHEHTSNAGPEALLAWFSERCLDTTGSEDA
YQMRLETDEAAVKIVTVHVSKGLQYPLVFCPYLWKGSTSTKEVAAFHDASGEAVRDFGSP
GFPDGMLRAGEEAMAEDLRLFYVALTRAEHRCCFISARVSGGVSALNYLLHAGESVQERV
AGAPERLLEAMEASSPLRMEADLRALAEESRGAVGFRLLTQDDLLRAALPAPKDDGSGAI
GQNLRRFSGRIDSSWRVSSFTSFSRQGHRPQELPDRDETASGSLPQDTVSTEDAEGIFAF
PRGAKAGLFMHEIFEHIDFSAPDPLAIRKLVDTSLQRYGYEPKWSDAVTGMVEGVLQMPL
GEGEDPFRLGALQPGSWVSELEFFMPMSLLQTEALQNPLRRHGLMPEGADYRKLADSLEF
QPATGMLLGFMDMVFEAGGRFWLLDWKSNHLGNRASDYAQDGMEAAMEEHRYHLQYLFYL
SALNRHLTLRVPGYTYRTHFGGVLYVFLRGVDGKGRGTGLYRVRPPAGLIEELTLAIAGE
FAS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatgagggcactggaacacgcatccgtcccgctcagcggaatgaacctcatcgaggcc
agtgccggaacgggcaagacccatgccatcggctcgctgtaccttcgtcttgtcgtcgaa
gaaagcctcctgcccgacagcattctcgtggtcacctataccgaagcagcgagcggggag
ctcagggggaggatccgggatcgcatccgcgacacccttcatgccctccgggaccctcag
tgttctcagcaggcgcttttggagatcggcagcgccgctgttgctgtcggcgtggaagaa
gccgcccggcggcttgagggggcgctcggctcatttgatacggcagcggtgcacaccatc
catgcgttctgcttgagggcactgcaggatcatgcgtttgaaagcggttcgctctacgat
accgcgctcggagccgatcagcatgaactgctgcaggggattgtcgaggatttctggcgc
cagcgtttcttttccccggaatcgccgctctccggctatatcggctggaaaaaggatgtg
actcctgaatccttcacccggcttctctcttcactccgtcccggcccgttcacctgcatc
aggcccgactacccccctgaagagccggctgccgccgaagcccgctgcacggaggcttac
cgggccgcggctggtatgtggaagcaagagcgtgccctcattgtctccatcctcaatgac
gatgccggactgagccgtgcggccggagcctataaaaaagaggagctcattctactcttt
gagcgcatggacgcctatctcgaaagcgggagcgtgtttgactgcttcaccggttttgag
cgctttacgtccgcatcgctgcgggcaaacatgaagaagaagtacgaggcccccgtccac
cgttttttcgatgccgctgaagcgctgctccgggaactcgacctgcgcctcctggtgttg
aagtctgaactggtccgctattaccgctcagtactgccacggcgcaaagaggagctgaat
gtcaggctgttcgacgatctgctcactgatctgtatctggcccttgaggctgagggtgga
ggaaggctgggtgaggtgctccgctcatcctacccggcggcactcatcgatgagttccag
gataccgatcccgtgcagtatgagatcttcaggatgatctatgccggttccgacctcccg
ctgtttcttatcggcgatcccaagcaggccatctacagcttccgtggtgcagacctcttc
gcctatctcaaggccgcagcgtccgtggacggcgattgccgcttcacgctcgagaagaac
tggcgttcagcgcccctcctgctcgaggggttcaacacgctgttcctgaagggtccgaac
cctttcctgtaccccggcattgcctatcgccccgtcagttccggtggcggcggtccccgg
gaccccttcacgcatgaggatgacaggcatccggaaccgcttcagctatggctgcttgat
gctcgggatgcaaagaacggatgcctcaccgtagaggcggctgaagagatggcggcagcg
gcggtggccggggagatcgtccgcctgctcggtgatgcccgggcaggaaaagcccgcatc
ggagatgtgccgcttgccgcttcggatatggcagtcatcgtccggacccacctgcaggcg
gcaaaggtgcacgccgccctcagggcgaggggtgtgccggcagtcatgcagagcgacagg
agcgttttcctctctccggttgccggtgaggtgctgctgcttctcgaagcccttctgcac
ccctccagtgaaggcaggatccgcagcgccctcgttaccaccatcctcggccggacaggc
aacgtcatcgccgcattgtccgctgacggggaggagtggattgcctgtctccgagacttt
gcacagtggaaccagctctggaggacgcaagggttcatggccatgacaagggcgttcatg
cgtaaggaaggggttcgccggagagtgctggcccgggagggcggccagcgtacactgact
gatatcctccactgtttcgagctcctgcatcagcatgaacatacctccaatgcaggtcct
gaagcgctgctggcctggttcagcgaacggtgcctcgacacgacgggaagcgaggatgct
taccagatgcggcttgagactgacgaggctgccgtaaagatcgtgaccgttcatgtcagc
aaggggctccagtatcctctggtgttctgtccgtatctctggaagggctcgacctcgacg
aaagaagttgccgcattccatgacgcttcgggtgaggcagtccgggatttcggttcgccg
gggtttcctgacggcatgctgcgtgccggagaggaggcgatggccgaggatctccggctt
ttttatgtcgcactgacacgggcggagcaccgctgctgtttcatttcggcgagggtgtcg
ggcggcgtatcggcactgaattacctgctgcatgccggggagtcggtgcaggagcgggtc
gcaggtgccccggagcgccttctggaagccatggaggcttcctcgccccttcggatggag
gcagatcttcgtgccctcgccgaagagtcccggggggccgtcggattccgtctcctcaca
caggatgaccttctgagggcagcgcttccggcgcctaaggatgatggttcgggagccatt
ggccagaatcttcgccggttcagcggccgtatcgacagctcatggagggtgtcgagcttc
acctctttcagccgtcagggccaccgcccgcaggaactgcccgaccgtgatgaaacagcc
tctggcagcttgccgcaggatacggtttcaactgaagatgcggaggggatattcgctttc
ccgaggggagcgaaagcgggtctcttcatgcatgaaatttttgagcatatcgacttttca
gcccccgatcctctggccatccgcaagctggttgacacttcgctccagcgatacggatac
gaacccaaatggagcgatgccgtcaccgggatggtggagggcgtgctgcagatgccgctg
ggtgaaggggaggatccgttccgcctcggtgcactgcagccgggcagctgggtttcagag
cttgagtttttcatgccgatgtcgctgctgcagactgaagcccttcagaaccccctccgc
cgccatggtctcatgccggaaggggcggattaccggaagctcgccgacagcctggagttc
cagccggcaacgggtatgcttctggggttcatggacatggtgttcgaagccggcgggcgg
ttctggctccttgactggaaatcaaaccatctcggcaacagggcatcggattacgcacag
gacgggatggaagccgcaatggaagaacaccggtaccacctccagtacctcttctatctt
tccgccctgaaccgccatctcacactccgggttccgggctacacctatcggacacacttt
ggcggagtactctatgtttttcttcgcggggtggacggaaagggtagagggacaggtctc
taccgggtccgtccgccagccgggctgattgaggaactgacattggcaattgccggggag
tttgcatcatga
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