Pelodictyon luteolum: Plut_1462
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Entry
Plut_1462 CDS
T00291
Name
(GenBank) Helicase RecD/TraA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plt
Pelodictyon luteolum
Pathway
plt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Plut_1462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plt03400
]
Plut_1462
Enzymes [BR:
plt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Plut_1462
DNA repair and recombination proteins [BR:
plt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Plut_1462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
AAA_22
nSTAND3
Helicase_RecD
AAA_28
NTPase_1
AAA_16
Herpes_Helicase
HHH
RsgA_GTPase
SLFN-g3_helicase
HHH_2
DEAD
UvrD-helicase
UvrD_C
NPHP3_N
AAA_29
Rad17
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABB24321
UniProt:
Q3B2W0
LinkDB
All DBs
Position
complement(1645129..1647348)
Genome browser
AA seq
739 aa
AA seq
DB search
MNGKPEDGKPEDGKPEGVTATERLSGVVETVRFFNPESGFSVLRIANDEEDPLVTVVGCI
ASVSPGQHVEALGRWQDDRNWGRQFKAESLSVIAPESREGMERYLASGMLKGVGPHLASL
MMSAWGTDVFQIIETDPERLRDIPGIGPKKQALIVESWREHQAVREIMMFLQSHGVGTTR
ALKIYKVYGADSIGAINRDPYRLSRDIAGIGFRTADAIAQSIGIAADSPLRARAGMSWVL
QELSSKGHCRVPEPMLLDAARQLLQIPDSVLEEALQVECAAGRIVAVLEGEERYCYLEYL
WKAEQGVVEGIRRIAGGKLPWGRLDVERSVTEAEERSRLELSVSQREAVRLALSNKLLII
TGGPGVGKTTIIRTLLSIPEVFGLKVLLTAPTGRAAKRLSEATGREGRTIHRLLEFDPAT
FDFKRSAHNPLEADLVIVDEASMIDVVLMNRLLPAIPKNAALILAGDVDQLPPVGPGAVL
SDLISSGTVRVVRLTEIFRQAATSLIIQNAHRVNRGEGLLRHEGPGLGDFYFVESSSSDD
IRRKLVQIVAERIPERFGLDPLDDIQVLTPMNRGPLGAESLNVLLQERLNGGGGKRIERF
GVAYGRGDKVIQTVNNYEKEVFNGDIGIISAIDHEEGELQVLFDGREVRYQTGELDEMAP
AWAITIHKSQGSEYPAVVIPLSMLHYPMLERNLIYTALTRGRKLVMVIGEEKALRLAVGK
CSSKGRLTGLADALKGHVH
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaagcctgaagacggaaagcctgaagacggaaagcctgaaggcgtcacggca
acagagcggctcagcggagttgttgaaacggtccggttcttcaaccctgaatcaggcttc
tcggtgcttcgcatcgccaatgatgaagaggatccgttggtgaccgtggtcggctgcatt
gcgtccgtttctccgggccagcacgtcgaagcgctcggccggtggcaggacgacaggaac
tggggccggcagttcaaggccgaaagcctgtcggtgattgcccccgagagccgggagggg
atggagcgatatcttgcttccggcatgcttaaaggggtggggccccacctggcctccctc
atgatgagcgcctggggaacggatgtattccagataatcgaaaccgatccggaacggctt
cgcgacattccgggtatcgggccgaaaaaacaggcactcatcgtggagtcgtggcgcgag
catcaggcggtgcgtgagatcatgatgtttctccagtcgcacggcgttggtacgacgagg
gcgttgaaaatctataaggtctacggcgctgactccattggcgccatcaaccgtgatccc
taccggctcagccgagatattgcgggcatcgggttcaggacggccgatgccattgcccaa
agcatcggtattgcagcggattcaccgctgcgcgcacgggccgggatgagctgggtgctg
caggaactttcttccaagggtcactgcagggttcccgaaccgatgcttctcgatgctgcg
cgtcagctgctgcagatacccgacagcgtccttgaggaggctctccaggttgaatgtgcc
gcggggcgcattgtagccgtcctggagggagaggagcggtactgttatctggagtacctc
tggaaggcagagcagggcgtggtcgagggcatccggcggattgccggagggaagcttccc
tggggcaggctggacgtagaacgttcggtcactgaggctgaagagcgttcacgcctggaa
ctctctgtgtcgcagcgggaagccgtgcggctggcgctttccaacaagctgctcatcatt
accggcggccccggtgtcggcaagaccaccatcatccgtaccctgctttccattccggag
gtgttcggcctcaaggtgctgcttaccgcaccaaccggcagggcggccaagcgcctttcc
gaggcgaccggccgggagggtcgaactatccaccgccttctggaattcgacccggcaacg
ttcgatttcaagcgctctgcacacaatccgctcgaggcggatctggtgattgtcgatgaa
gcctccatgatcgacgtggtattgatgaaccggctgcttccggccataccgaagaacgcc
gccctcatccttgccggcgacgtggaccagcttccgcctgtcggcccgggtgccgtgctc
agtgacctcatcagttccggaacggtacgggtggtgcgccttacagagattttccgccag
gcggcaacttcgctcatcatccagaacgctcaccgtgtcaaccggggggaggggctcctt
cgtcatgagggcccggggctcggtgacttttatttcgtggagtcctcgagttccgacgac
atccggagaaaactggtgcagattgtcgcggaacggatccctgagcgcttcgggctcgac
ccgctggatgacattcaggtactgacccccatgaaccggggacctctcggtgcagagtcg
ctgaatgtcctccttcaggagcggctgaacggcggaggcgggaagcggatcgagcggttc
ggggtcgcctacggcaggggggacaaggtgatccagaccgtgaacaattacgaaaaagag
gtcttcaacggcgatatcggaatcatttcggccatcgaccacgaagagggagagcttcag
gtgctttttgacggccgcgaagtgcgctaccagacgggtgaacttgatgaaatggctcct
gcgtgggccatcaccatccataaaagccagggatcggaatacccagcggtggtcatcccg
ctctcgatgctgcactacccgatgctggagcgcaacctcatctacacggcgctcaccaga
gggcggaagctggtcatggtcattggggaggaaaaggccctccgccttgcggtggggaag
tgcagttcgaaaggtcgcctcaccggcctcgccgatgccctcaaggggcatgtgcactga
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integrated database retrieval system
