Pelodictyon luteolum: Plut_1635
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Entry
Plut_1635 CDS
T00291
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plt
Pelodictyon luteolum
Pathway
plt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Plut_1635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plt03019
]
Plut_1635
03016 Transfer RNA biogenesis [BR:
plt03016
]
Plut_1635
Enzymes [BR:
plt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Plut_1635
Messenger RNA biogenesis [BR:
plt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Plut_1635
Transfer RNA biogenesis [BR:
plt03016
]
Prokaryotic type
tRNA degradation factors
Plut_1635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
KH_KhpA-B
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABB24489
UniProt:
Q3B2E2
LinkDB
All DBs
Position
1832329..1834527
Genome browser
AA seq
732 aa
AA seq
DB search
MIITKEINLGQGKTISIETGRMAKQADGATVVRMGDTMVIATVVSSRKTPSVNQDFFPLQ
VEYREKYYAAGKFPGGFFKREARPSEKEILSARLIDRALRPLFPTGYYHETQVIINVISS
DQQNDADVLGGLAASAAIMVSDIPFENAMSEVRVGRVNGLFIINPTIDELEGSDIDISIG
GTADTICMLEGEMKEISEAEMLDAIKFGHEAIKKLCQLQNELAGEVAKAKRPFTPLQVPA
ELSEYVKNACESSLKELAYKPLAKEVRADETKAIYSETVKKAIEHFSAAFGPEALAADPS
KALCLNEHIIEEEIHSFEKNVMRRMILDDGKRLDGRNLEQVRPITIELGVIPRAHGSALF
TRGETQALVAVTLGTKKDAQSVDTLTNSADKRFMLHYNFPPFSVGEVGRLGSTGRREIGH
GNLAERSIKMVAPGEQEFPYTVRIVSEILESNGSSSMASVCGGTLALMDGGVPLKKPVSG
IAMGLIKDGEEYAVLSDILGNEDHLGDMDFKVAGTRDGITACQMDIKIDGLDYHILENAL
AQARRGRFHILDKMEEAIPASREELAQYAPRLTAIQVPVESIGLIIGKGGETIRSITEET
GAEINIEDDGTVTIACSSNEGTKAAVEIIKALIAKPEVGTIYVGKVRDVRDELGAFVEFI
PKTDGLVHISEISRERVTKVSDHLKVGDRIKVKLVDIRKDPRTGKTRFALSMKAVDEEPV
NGTEAGAAPENN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgattatcacgaaagaaatcaatctcggacagggcaaaacgatctcgatcgaaaccggc
aggatggccaaacaggccgacggtgccaccgtggtccgcatgggcgacaccatggtcatc
gccaccgtcgtatccagccgcaaaacaccttctgtcaatcaggacttctttccgctccag
gttgaataccgcgagaaatactatgccgcaggcaagttccccggcggattcttcaagcgt
gaagcccgtccctcggaaaaagagatcctttcggcacgccttatcgaccgcgcactccgc
ccgctcttcccgaccggctactaccacgagacccaggtcatcatcaacgtcatctccagc
gaccagcagaacgatgccgacgtgctcggcggactggccgcatcggcagccatcatggtc
tccgacatccccttcgaaaacgccatgtcagaggtccgcgtcggcagggtgaacggcctg
ttcatcatcaacccgaccatcgacgagcttgagggcagcgatatcgacatcagcatcggc
ggcaccgccgacaccatctgcatgctcgagggcgagatgaaggagatttccgaagccgag
atgctcgacgccatcaaattcggccatgaagccatcaagaagctctgccagctccagaat
gaactcgcaggtgaggtagccaaagccaaacgccccttcaccccgctccaggttcctgca
gaactctcggagtatgtgaagaacgcctgcgaaagcagcctgaaagagctggcctacaag
ccgcttgcaaaggaagtgcgcgcagatgagacgaaggcgatctacagcgagaccgtcaaa
aaggccatcgagcatttcagtgccgccttcggtcctgaagcactcgctgccgacccgtcc
aaagcgctctgcctgaacgagcacatcattgaagaagagatccactcctttgaaaagaac
gtcatgcgccgcatgatcctcgacgacggcaaacgacttgacggcaggaaccttgagcag
gtccggcccatcacgattgaactcggcgtcatcccgagagcccacggctccgctcttttc
accagaggcgaaacccaggcgcttgtcgccgtcaccctcggaaccaagaaagacgcgcag
tctgtcgacaccctcaccaacagcgccgacaagcgcttcatgctccactacaacttcccg
cctttctcagtcggtgaagtcggcagactcggttccaccggacgccgcgaaatcggacac
ggcaaccttgccgagcgctccatcaagatggtcgcccccggcgagcaggagttcccatac
actgtccgcatcgtctccgaaatccttgagtcgaatggttcatccagcatggcttcggtc
tgcggcggcaccctcgcactgatggacggtggcgttccgctgaagaagccggtctccggc
atcgcaatgggcctcatcaaagacggcgaagagtacgcagtcctctccgacatcctcggc
aacgaggaccatctcggcgacatggacttcaaggtagccggcacccgggacggcatcacc
gcatgccagatggacatcaagatcgacggactcgactaccacatcctcgagaacgcgctg
gcacaggcccgtcgcggccgcttccacatccttgacaagatggaggaagccattcctgca
tcgcgtgaggaactggcccagtacgctccccgactcaccgccatccaggttcctgttgag
tccatcgggctcatcatcggcaagggcggcgaaaccatacgcagcatcaccgaagagacc
ggtgcggagatcaacatcgaggatgacggcactgtcaccatcgcatgctccagcaacgaa
ggcaccaaggctgccgtcgaaatcatcaaggcgctcatcgccaaacctgaagtcggcacc
atctatgtcggcaaggttcgcgacgttcgcgacgagcttggcgcattcgtcgagttcatc
ccgaagaccgacggcctcgtccacatctcagagatctccagggagcgggtcaccaaagtc
agcgaccacctgaaggtcggtgaccgcatcaaggtcaagcttgtcgatatccgcaaggat
ccgaggaccggcaaaacccgcttcgccctctcaatgaaggcggtggatgaagagccggtc
aacggcacagaggccggcgccgcccctgaaaacaactga
DBGET
integrated database retrieval system
