Pelodictyon luteolum: Plut_1667
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Entry
Plut_1667 CDS
T00291
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plt
Pelodictyon luteolum
Pathway
plt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Plut_1667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plt03019
]
Plut_1667
03400 DNA repair and recombination proteins [BR:
plt03400
]
Plut_1667
Enzymes [BR:
plt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plut_1667
Messenger RNA biogenesis [BR:
plt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Plut_1667
DNA repair and recombination proteins [BR:
plt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Plut_1667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ABB24521
UniProt:
Q3B2B0
LinkDB
All DBs
Position
complement(1870374..1872221)
Genome browser
AA seq
615 aa
AA seq
DB search
MRVQISDEAVHEALQRVFGFQAFRPNQREVVRAILEGRDVFAVMPTGGGKSLCYQLPAVL
LPGTCIVVSPLIALMKDQVDGARANGIRAAFLNSSQLPEERQMVANALQSGELELLYVAP
ERFAVDSFRAMLRGIRISMAVIDEAHCISEWGHDFRPDYLSLSALVDLAGMAPVAAFTAT
ATERVQADTLLRLALRDPFLVRASFDRPNLSYEVLFKDSADRQILSILRRFSGKAGIIYR
ASRKSVNDTAAMLRAKGFRALPYHAGLDDREREQNQNAFIRDEVDVIIATVAFGMGIDKS
NIRFVIHADLPKSIENYYQETGRAGRDGEPAHCTLLYSQGDIAKVRFFIDAMADGEERAR
ALFALSTVSAFAASAVCRRRALLEHFGEAYSKDNCGSCDVCTGNFDTIDCSVESQILLSA
MVRTDERFGACHVIDIVTGSLNKKIKELGHDRIKTFGAGKGRDKKFWRRLVDELLVRGVI
MKTEGLYPVIILTEKAVAVLRGEAGIEMLMRADAPKAERKKAEPDPGGYDSGLFEQLRAL
RKEIADEQGVPPYVVFSDRSLREMSSLLPENGDEMLAVSGVGEAKLQRYGSQFLQLIGRW
RSEHPTVAGREVAPC
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagggtccagatttctgacgaagcggtgcatgaggccctgcagcgggtattcgggttc
caggcgttccggccgaaccagcgtgaggttgtacgggctatccttgagggccgggacgtg
tttgcggtgatgccgacgggcggaggaaagtcgctctgctatcagcttccggccgtgctg
cttcccggcacctgcatcgttgtcagtccccttatcgcccttatgaaagaccaggtcgac
ggcgcacgtgccaacggcatccgtgcagccttcctcaacagttcgcagcttcccgaagag
cggcagatggtggcgaatgcgctgcagtcgggagagctcgagctgctctatgtcgcaccc
gagcggtttgccgtcgactccttccgggcgatgctcaggggcattcggatcagcatggcc
gttatcgacgaggcgcactgcatctccgagtggggccacgatttccggcccgactatctc
tccctctccgcacttgtggaccttgccggtatggcccctgtggcggccttcacggcaacg
gccaccgagcgggtgcaggccgataccctcctgcgtctcgccctgcgtgatccgtttctc
gtcagggcctcgttcgaccgcccgaacctttcctacgaggtgctcttcaaggacagtgcc
gaccgccagatactctcgatactgcgcaggttcagcggtaaggcaggcatcatctaccgc
gcaagccgcaaaagcgtcaacgacaccgccgccatgcttcgggcgaaggggttccgtgcg
cttccctaccatgcagggcttgacgacagggaacgggagcagaaccagaatgccttcatc
cgcgatgaggtggacgtgatcatagccaccgtggccttcggcatgggaatcgacaagtcg
aacatccggttcgtcatccacgccgacctccctaaaagcatcgagaactactaccaggag
accggtcgtgccggacgcgatggcgagccggcgcactgcacgctgctctacagtcaggga
gatatcgcgaaggtccgctttttcatcgatgcgatggcggacggggaggagcgcgcacgt
gctctatttgccctctcgacagtttctgcttttgccgcctcggcagtctgccggcgcaga
gcgcttctcgagcatttcggcgaggcctattcgaaagacaactgcggttcctgtgatgtc
tgcaccgggaacttcgacacaatcgactgcagcgttgagtcgcagatactcctatctgcc
atggtgcgcaccgatgaacggttcggcgcctgtcatgtcatcgacattgtcaccggcagc
ttgaacaaaaaaatcaaggagcttggccacgaccgcatcaagacgttcggagccggaaaa
gggcgtgacaaaaagttctggcggcggcttgtcgacgagctgctggtgcgcggggtgatc
atgaaaacagaggggctctatcctgtcatcatcctgaccgaaaaggcggttgcagtgctg
agaggtgaggccggaatcgagatgcttatgcgggctgatgccccgaaggccgaacggaaa
aaggcggagccggaccctggcggatacgacagcggactgttcgaacagctcagggcgctg
cgaaaggagattgccgacgaacagggcgttcctccctatgtggtgttttccgaccgttct
cttcgggagatgtcatcactgctgcctgaaaacggcgatgagatgcttgcggtatcgggt
gttggagaggccaagcttcagcggtacggcagccagttcctgcagctcatcgggcgctgg
cggagtgaacatcccactgtagccggcagggaggtggccccatgctga
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