Photorhabdus laumondii subsp. laumondii TTO1: plu0909
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Entry
plu0909 CDS
T00149
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase rumA (23S rRNA(M-5-U1939)-methyltransferase)
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plu03009
]
plu0909 (rumA)
Enzymes [BR:
plu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
plu0909 (rumA)
Ribosome biogenesis [BR:
plu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
plu0909 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_15
Ribosomal_L22
CMAS
Motif
Other DBs
NCBI-ProteinID:
CAE13204
Pasteur:
plu0909
UniProt:
Q7N839
LinkDB
All DBs
Position
1045574..1046890
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AA seq
438 aa
AA seq
DB search
MVQFYSPNRRTVNRHIITVTADNLDAQGQGVARHQGKTIFVAGLLPGEQAQVQLTEEKRQ
FAKAKLVKRLSDSPYRVNPRCPHFGVCGGCQQQHVAPDLQRESKASVLEHLIRRETGVTV
SAKPVILGPEYGYRRRARLGLHYQIKQRQLVIGFRQNQSNELVAIKECPVLRPELEQLLQ
PLSQCLNSLKAVKRLGHVELVLADNGPLMILRHLDPLKREDKEKLGTFSVQHNVAVYLAA
DETSLESLNELPEPWYQVDGLKLVFSPRDFIQVNDQVNQQMVAQAIEWLDLQPNDNVLDL
FCGMGNFTLPIGRIVQSVVGVEGVATLVANGQYNAKINNLDNISFCHENLEADIHHQPWA
KLGFNKVLLDPARAGAVGVMSHIVELVPEKVVYVSCNPTTLARDSKILLEAGYQIISVRM
LDMFPHTGHLESMALFSR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaattttattcccccaatcgtcgaacggtaaatcgacatatcatcacagttacc
gctgataatctggatgcccaggggcagggcgtagctcgccatcagggtaaaactattttt
gtcgccgggttattgcccggtgaacaggcacaggtacaactaacggaagagaagcgacag
tttgcaaaagcaaagttggttaagcgtttatctgacagtccatatcgtgtgaatccccgt
tgtcctcattttggagtatgtggcggttgtcagcaacaacatgttgcaccggatttacaa
cgtgaaagtaaagccagcgttctcgaacacctgattaggcgagaaactggtgtaacggtt
tctgccaaaccggtgattcttggccctgaatatggttatcggcgccgggcaaggcttggt
ttacattatcaaataaaacagcgccaactggtgataggatttcgtcaaaatcaatccaat
gaattagttgctataaaagagtgcccggttttgcgacctgaattggaacagttattacag
ccattatctcagtgtctgaatagtttgaaagcggttaaacggttggggcatgtggagttg
gtgctagcagataatggcccattgatgatattgcgccatcttgatcccttgaagcgggaa
gataaagagaaactaggcacattttccgtgcaacataatgtcgctgtctatctggcggcg
gatgaaacttcacttgaatcactgaatgaactgccggaaccttggtatcaggtagatggg
ctgaaactggttttcagtccaagagattttattcaggttaacgatcaggtgaatcaacaa
atggttgctcaggcgatagagtggctcgatttgcaaccgaatgataacgtgcttgatcta
ttctgtggaatggggaattttaccttacctattggtcgcatagtgcaatctgtagtcgga
gtcgaaggggttgccacgttggtggctaatgggcaatataatgccaaaataaataatttg
gataacatatctttctgccatgaaaacctggaagctgacatacatcatcaaccttgggct
aaactggggtttaacaaggttttattagatccggcgcgtgctggggcggtaggagtcatg
tcacacattgttgagctggtgccagagaaagtagtctacgtctcttgtaatccaacaaca
ttggcgcgggacagtaagattctgcttgaggctggctatcaaattatcagtgtgcggatg
ctggatatgtttccgcatacaggtcatctggagtcaatggcgctatttagtcgttag
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