Photorhabdus laumondii subsp. laumondii TTO1: plu1511
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Entry
plu1511 CDS
T00149
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Pathway
plu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
plu1511 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plu03019
]
plu1511 (rhlE)
Enzymes [BR:
plu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
plu1511 (rhlE)
Messenger RNA biogenesis [BR:
plu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
plu1511 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
UTP25_NTPase-like
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAE13804
Pasteur:
plu1511
UniProt:
Q7N6N5
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All DBs
Position
1810367..1811671
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AA seq
434 aa
AA seq
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MEHFLFMNFKSLGLSADILRAVEEQGYSAPTPIQQQAIPVVLAGKDLLASAQTGTGKTAG
FTLPMLQRLNDSPIQMKGRRPVRALILTPTRELAAQVGENVRDYSKYLRLRSLVVFGGVS
INPQMMKLRGGVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMGFIHDIRRVL
NKLPPKRQNLLFSATFSDDIKSLASKLLRDPVSVEVARRNSASEQIEQLVHFVDKKRKGE
LLSFLIGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTASAIHGNKSQGARTRALADFKDG
RIRVLVATDIAARGLDIDQLPYVVNFELPNVAEDYVHRIGRTGRADATGQALSLVCVDEH
KLLKDIERLLKREIPRMAIPGYEPDPTIKAEPIQNGRQARGDNRQKNSHRRSGAPSRQRS
SSHDVSHKSPNVRG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ctggagcatttcttatttatgaatttcaaatcacttggcttaagtgctgatattttgcgt
gccgttgaagaacagggttattcagcgccgacaccaatccaacaacaggcaattcctgtt
gtattagcaggtaaagatttattagcgagtgctcaaacaggcacaggtaaaaccgcaggt
tttaccttacccatgctgcaacggttaaatgattcccctattcagatgaaagggcgccgg
ccagtcagagcattaatcctgactccaactcgtgaattggctgctcaagtgggtgaaaat
gtccgcgactacagtaaatacctcagactgcgctctctggttgtttttggcggtgtcagt
attaaccctcagatgatgaaattgcgtgggggtgtggatattttagtcgcaacaccgggg
cggttactggatcttgaacatcaaaatgcggttgatttatcccgggtagaaattttggta
ttggatgaagctgaccggatgctggatatggggtttattcatgatattcgtcgagtgctg
aataaattaccaccgaaacggcaaaatttactgttttccgcgactttctctgacgatatc
aaaagcttagccagtaagttattgcgtgatcccgtcagtgttgaagttgcacgtcgtaac
tctgcttctgaacagattgaacagcttgttcactttgtcgataaaaagcgtaaaggtgag
ctgctctctttcttgatcggcagccgtaactggcagcaagttctggtatttacccgaacc
aaacatggcgcgaaccgtttggcagaacagttaaataaagatggtgtaacggcttcggct
attcatggtaataaaagtcagggggcgagaacccgtgcactggctgattttaaagatggc
cggatcagagtgctggtagcgacagatattgcggcccgtggtctggacattgatcaactg
ccttatgtggtgaattttgaattgcctaatgtcgctgaagattatgtccaccgtattggt
cgtactggccgagcagatgcaacagggcaggcactttctctggtctgtgttgatgagcat
aagctgttgaaagatattgagcgtttgttaaaacgggagattccccgtatggcaattccc
ggttatgagccagatccaacgatcaaggctgaacctatccaaaacggtcgtcaggcacgt
ggcgataatcggcagaaaaatagccatcgccgttctggggcaccttcgcgtcagcgtagc
agcagtcatgatgtatcccataaatcgcctaacgtcagaggttaa
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