Photorhabdus laumondii subsp. laumondii TTO1: plu1623
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Entry
plu1623 CDS
T00149
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit (IHF-beta)
KO
K05788
integration host factor subunit beta
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plu03032
]
plu1623 (ihfB)
03036 Chromosome and associated proteins [BR:
plu03036
]
plu1623 (ihfB)
03400 DNA repair and recombination proteins [BR:
plu03400
]
plu1623 (ihfB)
DNA replication proteins [BR:
plu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
plu1623 (ihfB)
Chromosome and associated proteins [BR:
plu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
plu1623 (ihfB)
DNA repair and recombination proteins [BR:
plu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
plu1623 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
DUF5666
Motif
Other DBs
NCBI-ProteinID:
CAE13916
Pasteur:
plu1623
UniProt:
Q7N6D2
LinkDB
All DBs
Position
1939744..1940028
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHISAKTVEDAVKEILDHMAITLADGERIEVRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRVNIYD
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaaagacttgctggccagcaatctcatatttcggccaaa
accgttgaagatgcagtgaaagaaatactcgaccatatggcaataacattggcagatggt
gaacgtatagaggtgcgcggattcggcagtttttctcttcactaccgtgctccgcgcgta
ggtcgtaaccctaaaaccggtgataaagtggagctggaaggtaaatacgttccccatttt
aaacctgggaaagagttgcgtgatcgcgtgaatatctacgattaa
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