Photorhabdus laumondii subsp. laumondii TTO1: plu2384
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Entry
plu2384 CDS
T00149
Symbol
rnb
Name
(GenBank) Exoribonuclease II (ribonuclease II) (RNase II)
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plu03016
]
plu2384 (rnb)
Enzymes [BR:
plu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
plu2384 (rnb)
Transfer RNA biogenesis [BR:
plu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
plu2384 (rnb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
CAE14708
Pasteur:
plu2384
UniProt:
Q7N4F5
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Position
2798011..2799954
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AA seq
647 aa
AA seq
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MFQNNPLLAQLKQQLHSQTLRVEGLVKGTEKGFGFLEVDGQKSYFIPPPHMKKVMHGDRV
TAAIHTDKEREIAEPETLIEPFLNRFVGRIQKKENDNRLWITPDHPLLKDAIPCRPTNQV
THPFQHGDWAVAEMRHHPLKGSRGFHAEITGYITESDNHYAPWWVTLTRHNLERDAPAMT
ADCQMNDGDLERIDLTSLDFVTIDSATTEDMDDALHIAKQDDGSLKLSIAIADPTAYIAA
GSELDQIAHQRAFTNYLPGFNIPMLPRDLSENLCSLRPNARRPALVCQVSILEDGQLGDD
IAFFSTWVESKAKLVYDEVSDWLEKTGTWEPASEAIKTQITLLKEMSDRRNQWRHQNALI
FKDRPDYRFILDENGYVLDIVVEQRRTANRIVEEAMITSNLCAAKILRDKLGFGIYNVHM
GFEPLQIEQVVELLQENDIDAKTEELLTLDGFCKLRRELDKKPTQFLDSRIRRFQTFAEI
KPEPGPHFGLGFDAYATWTSPIRKYSDMINHRLLKAIIQKTDVEQPSEETCLQLAERRRL
NRMAERDVGDWLYARFLQPHAGTEQRFTAEIIDITRGGLRVRLADNGAVAFIPAPFLHAV
RDELQCSQETGTVIIKGEVAYQLNDIIDVRIDEVRMETRNIVARPTA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaacaacccgctgcttgcacagctaaaacagcaacttcattcccaaacactt
cgagtagaaggtttggtcaaaggtaccgaaaaaggattcggattcttagaagtcgatggg
caaaaaagttatttcattcctcccccacacatgaaaaaagttatgcatggcgatcgagtg
actgccgctattcatactgataaagaaagagagatcgccgagccagaaacattgattgaa
ccatttctaaatcgcttcgtcggtcgtatccagaaaaaagaaaatgacaaccgtttatgg
atcactcctgatcacccactgctaaaagatgctatcccttgccggccgaccaatcaggtc
actcatccatttcagcatggtgattgggccgtcgctgaaatgcgtcatcatccattgaaa
ggcagccggggttttcatgcagaaattaccggctatatcactgaaagcgacaatcactac
gccccttggtgggtaacactcacgcgccataatctggaacgtgatgctcccgcgatgact
gccgattgccagatgaacgatggcgatcttgagcgtattgacttaacgtcgctggatttt
gtcactattgacagtgcaaccacagaagatatggacgatgctttgcatattgctaagcaa
gatgacggtagcctgaaactcagtatcgccattgctgatccaaccgcttatattgcggct
ggcagcgagctggatcaaatcgcccatcaacgtgctttcactaactacctgccgggtttt
aatatccccatgttgccacgcgacctgtcagagaatttatgctctctgcgtcctaacgcc
cgccggccggcattagtttgtcaggtttctattctggaagatggtcaactaggtgatgat
attgcgtttttctctacctgggttgaatcaaaagctaaattggtttacgacgaagtttct
gactggctggaaaaaaccgggacttgggaacccgcttccgaagcgattaagactcaaatc
acgcttttgaaggaaatgagtgatcgccgtaaccaatggcgccaccaaaatgcgcttatt
ttcaaagatcgtcctgattatcgcttcatcctcgatgagaatggttacgtactggatatc
gtggtagaacaacgccgtacagccaaccgtattgttgaagaagccatgatcacttctaac
ctgtgcgccgcaaaaatcctgcgcgataagttaggctttggtatttacaatgtccatatg
ggttttgagccactgcaaatcgaacaagtggttgaattactgcaagaaaatgatattgat
gccaaaacagaagaattattgactctggatggcttttgtaaattacgccgtgaattggat
aaaaaaccaacacaattccttgatagtcgcattcgtcgtttccagactttcgcagaaatt
aaacctgaacccggtcctcattttggtctcggttttgatgcttacgccacctggacatca
ccgatccgtaaatacagcgacatgattaaccatcgtttactgaaagcgattattcaaaaa
accgatgtagaacagccctcagaagaaacctgtttacaactggctgaacgtcgcagactg
aatcgtatggccgaacgtgatgtgggggattggctatatgcccggttcctgcaaccacac
gcaggaaccgaacaacgatttaccgcagaaatcattgatatcacccgtggtggtttacgt
gtccgactggccgataacggtgcagtggcctttataccagcacccttcctgcatgccgtg
cgtgatgaactgcaatgtagccaagagaccggtactgtgattatcaaaggtgaagtcgct
taccaattgaacgatattattgatgttcgtattgatgaagtcagaatggaaacgcgtaat
attgtcgcccgccctacggcctga
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