Photorhabdus laumondii subsp. laumondii TTO1: plu2435
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Entry
plu2435 CDS
T00149
Symbol
topA
Name
(GenBank) DNA topoisomerase I (omega protein) (relaxing enzyme) (untwisting enzyme) (swivelase)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plu03032
]
plu2435 (topA)
03400 DNA repair and recombination proteins [BR:
plu03400
]
plu2435 (topA)
Enzymes [BR:
plu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
plu2435 (topA)
DNA replication proteins [BR:
plu03032
]
Prokaryotic type
DNA Topoisomerases
plu2435 (topA)
DNA repair and recombination proteins [BR:
plu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
plu2435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAE14809
Pasteur:
plu2435
UniProt:
Q7N4B4
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Position
complement(2857965..2860565)
Genome browser
AA seq
866 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSASQKSSSSSTDKSKKKVK
KDEKAVLVNRMGVDPYRGWEANYQILPGKEKVVAELKSLAEKVDHVYLATDLDREGEAIA
WHLREVIGGDGDRFSRVVFNEITKNAIKQAFDNPGELNIHRINAQQARRFMDRVVGYMVS
PLLWKKVARGLSAGRVQSVAVRLVVEREREIKAFVPVEYWQLHADLLAKGEISLHMEVTH
QQGKPFKPVNSEQTQAAVSLLEKARYKVLDREDRPTSSKPSAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDALDMVRDYISDNFGDKYLPEAANTYSSKEN
SQEAHEAIRPSSVDIVAEQLKDMDVDAQKLYQLIWRQFVACQMTPAKYDSTTLTVQAGDF
ELRAKGRTLRFDGWTKVMPVLRKGDEDHTLPVVEIGTELDLQQLIPSQHFTKPPARYSEA
SLVKELEKRSIGRPSTYASIISTIQERGYVRVESRRFYSEKMGEIVTDRLEENFNELMSY
DFTARMEDQLDQVASNKVEWKGVLDEFFTDFSEQLDVANKEPEEGGMRPNPMVITSIECP
TCQRSMGIRTATTGVFLGCSGYALSPKERCKQTINLIPENEILNVLEGDEAETNALRARR
RCKKCGTAMDSYLIDSQRKLHVCGNNPACDSYEVEEGEFRIKGYDGPVIECDKCGAEMHL
KMGRFGKYMGCTNETCKNTRKILRSGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELARFKERLPEKLRYLADAPVVDAEGNKTVIRFSRKTKQQYA
SSEKNGKATGWSVFYVDGKWVEKDKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtaatagtggagtccccggcaaaggccaaaacaatcaacaagtat
ttgggaagtgactacgtggtgaaatccagcgttggtcatatccgtgatttgccgaccagt
ggctcagccagccaaaagagttcgagctcatctaccgataagtctaagaagaaggttaaa
aaagatgagaaagctgtattagtcaaccgcatgggggttgatccataccgtggttgggaa
gcgaattatcagattttgccgggcaaagagaaggtcgtggcagagctgaaatcactggct
gaaaaagttgatcatgtttatctcgcaacggatcttgaccgcgagggagaagccattgca
tggcacttgcgggaagtgattggtggtgatggcgatcgttttagccgggttgtttttaat
gaaatcactaaaaatgccatcaaacaggcatttgataatccgggtgaattaaatattcac
cggataaatgctcaacaagctcgccgttttatggatcgagttgtggggtatatggtttct
ccgctactgtggaaaaaggttgccagagggctctctgccggccgtgtgcaatcagtggcg
gtacgccttgtggtagaaagagagcgtgaaattaaagcgtttgtaccggtagaatattgg
caattacatgctgatttgctggcgaaaggcgaaatctcgctgcatatggaagtgacccat
cagcagggtaaaccatttaagccggttaatagtgaacaaactcaagccgccgtctcttta
ctggaaaaagcccgttacaaagtgcttgatcgtgaagatcgcccaacatccagtaaaccg
agtgcgccgtttatcacatctacattgcaacaggcagccagcacgcgtttagggtttggt
gttaaaaagaccatgatgatggctcagcgtttgtatgaggctggatatattacttatatg
cgtactgattcaactaacttgagtcaggatgcgctggatatggttcgtgattatatcagt
gataattttggcgataaatacctgccagaagcagccaatacttacagcagcaaagagaat
tcacaggaagcgcatgaagcgattcgtccttccagtgttgatatcgtggcagagcaactg
aaagatatggatgtggatgcacagaagctgtatcagctaatctggcgtcagtttgtggct
tgtcagatgacaccggcgaaatacgattccacaacattgacggtacaggcgggtgatttt
gagttgcgggccaaaggtcgtacattgcgttttgatggctggacaaaagtgatgcctgtg
ttgcgcaaaggtgatgaagaccacacgttgccggttgttgaaattggtacagaacttgat
ttgcaacaactgatcccaagccagcacttcaccaaaccaccggcacgttacagtgaggca
tccttggttaaggagctggagaaacgcagtattggtcgcccatccacttatgcttccatt
atctccacgattcaggagcgtggttatgttcgcgtagagagccgccgtttctactcggag
aaaatgggagagattgttactgatcgtctggaagaaaatttcaacgagctgatgagttat
gattttactgcgcgaatggaagatcagcttgatcaggttgcaagtaacaaagtcgaatgg
aaaggggttctggatgagtttttcacggattttagtgaacagctagacgtcgccaataaa
gagccggaagagggcggcatgcggcctaatccgatggttattacctctattgagtgcccg
acatgtcagcgctctatgggcattcgaacggcaaccaccggcgttttcttgggttgttct
ggttatgcgttatcacctaaagagcgttgtaagcagacgataaaccttattcctgaaaat
gaaattcttaatgtcttggaaggggatgaggcggaaacaaatgcattgcgcgcccgtcgt
cgctgtaaaaaatgtggtacagcgatggacagttaccttattgatagccaacgtaagtta
catgtttgtggtaataacccggcttgtgatagctacgaagtggaagagggcgaatttcgc
attaagggatatgacggcccagttatcgaatgtgataaatgtggcgctgaaatgcacctg
aaaatggggcgtttcggtaaatacatgggctgcaccaatgaaacttgtaaaaatacccgc
aaaatcttgcgtagtggggaagtcgcgccgccaaaagaggatccggttccgctaccagag
cttccttgtgaaaaatctgatgcctattttgtattgcgtgatggtgcagccggtgtattt
ttagcagcaaacactttccctaaatcaagagaaaccagagcgccgttggtagaagagtta
gctcgttttaaagagcgtttgccggagaaattacgctatctggctgatgcgcctgtggtg
gatgctgaaggtaataaaacagttattcgttttagccgtaagactaaacagcaatatgct
tcttcagagaaaaatggcaaagcaacggggtggagtgtgttttatgttgatggaaaatgg
gttgagaaagacaaaaagtaa
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