Photorhabdus laumondii subsp. laumondii TTO1: plu3318
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Entry
plu3318 CDS
T00149
Symbol
yfhD
Name
(GenBank) Putative periplasmic binding transport protein YfhD
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plu01011
]
plu3318 (yfhD)
Enzymes [BR:
plu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
plu3318 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
plu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
plu3318 (yfhD)
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
ABC_C
NMT1
Motif
Other DBs
NCBI-ProteinID:
CAE15692
Pasteur:
plu3318
UniProt:
Q7N1Z3
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Position
3936207..3937553
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AA seq
448 aa
AA seq
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MNISWPNKQQEQINRIITRGELRISTISSPLIHLTGKKEANGFDYELVQRFANYLGVKLE
IKFRKNINQLFDDLEKGEADFLAAGLTYHQERLDQTRTGPAYYSVSQQLIYRKGTPRPRS
FKDLKGKLLVASGSAHASTLKKIEKENFPELEWEETPQYNTRELLEQVSEGKLDYTLGDS
INVALQQRTHPNLAVAFDVSEDNPLTWYLKRIDDYSLYAAMLDFFSQLTEKNVMPRLEEK
YFGHVHSFDYFDTLSFLSAIDNILPTYQPLFEKYSGDISWKLLAAIAWQESHWDPQAISP
TGVRGLMMLTNQTAKGLGVVDRLDPEESIKGGAIYLQNLMKRLPENIPKDERIWFALAAY
NMGYGHMLDARKLTASQKGNPDSWLDVKKRIPLLSQKKYYTNTTYGYARGHEAYRYIENI
RRYQLSLVGYLQAKENRKKLIPQENQPK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ctgaacatcagttggccgaataaacagcaggagcagattaacaggatcattaccagagga
gagctacggatcagcaccattagctcacctctgatccatcttaccggtaagaaagaagcc
aatggatttgattacgagctggtacaacgctttgctaattaccttggcgtcaaattagaa
atcaaatttagaaaaaatatcaatcagttatttgatgatctggaaaagggtgaggctgat
tttctggccgctggcctgacttatcatcaagaaaggctggatcaaacccgcacaggtcca
gcttactattctgtatcccaacaactgatttatcgcaaagggactccacgccctcgctct
tttaaagacttaaaaggtaaactgctggtcgcttctggttctgctcatgccagcacattg
aaaaagatagaaaaagagaattttcctgaactcgaatgggaggagacaccgcaatataac
actcgcgaactactggaacaggtatcagaaggtaaactggattatacgttaggtgactcg
attaatgtcgcgttgcaacaacgtactcaccctaatctggccgtcgcttttgatgtgagt
gaagataacccgctgacatggtatttaaaacgcattgacgactacagcctttatgctgcc
atgctggattttttcagccagctaacggaaaaaaatgtcatgccacggttggaggagaaa
tactttggtcacgtccactcatttgattatttcgatacactctcttttctcagtgccatc
gataatattctgcctacctatcagccactatttgaaaaatattccggtgatatcagttgg
aaactgctcgctgccattgcctggcaagaatctcattgggacccacaggcaatctcaccc
acgggtgtgcgtggcctgatgatgttaaccaaccagacggctaaagggttaggcgtcgtt
gatcgccttgatccggaggagagtattaaaggaggggcgatctatctgcaaaatctaatg
aaacgactacctgaaaatatccctaaagatgagcgcatctggtttgcactggcagcttac
aatatgggttatggacatatgttagatgcccgcaaactgacggcatcacagaaaggaaat
cccgatagctggcttgatgtcaaaaaacggattccactattaagccagaaaaaatattat
acaaataccacctatggctatgcccgtggacatgaagcttatcgctatattgaaaatatt
cgccgttatcagcttagtttagtcggatatttacaggccaaagaaaatcggaaaaaatta
attccccaagaaaaccaaccaaaataa
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