Photorhabdus laumondii subsp. laumondii TTO1: plu3349
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Entry
plu3349 CDS
T00149
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plu03009
]
plu3349 (srmB)
Enzymes [BR:
plu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
plu3349 (srmB)
Ribosome biogenesis [BR:
plu03009
]
Prokaryotic type
rRNA helicases
plu3349 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF3834
AAA_30
AAA_22
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
CAE15723
Pasteur:
plu3349
UniProt:
Q7N1W6
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All DBs
Position
3976851..3978188
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AA seq
445 aa
AA seq
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MTATNFSELELDERLLDALNDKGYSRPTAIQAAAIPAAMDGRDVLGSAPTGTGKTAAYLL
PAMQHLLDFPRKKSGPPRILILTPTRELAMQVADQAKEFAAHTHLDIATITGGVAYMNHA
EIFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFANDIETIAGETRW
RKQTMLFSATLEGEAIRDFAERLLEDPVEIDAEPSRRERKKIQQFYYRADNSAHKTALLC
HLLKQPDVTKSIIFVRKRERVHELADKLHQAGIKARFLEGEMVQAKRTEAVKLLNDGSVT
VLVATDVAARGLDIDDISHVFNFDLPRTADVYLHRIGRTARAGRKGTAITLVEAHDHPLL
GKISRYLNEPLTSRVVDELRPTTKAPSDKARNKPSKKVLAKRKEKKKAEESKKKAKIRHR
DSKNIGKRRKPSGNPKPETPVSSDA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaacaaacttttctgaacttgagcttgatgaacgcctgcttgacgccctgaat
gataaaggttattcccgcccaacagcaattcaggctgcggctattccggcagcaatggac
gggcgtgatgtactaggatcagcgcctaccggtaccggcaaaactgccgcttacctgctg
cccgctatgcaacatttattggattttccacgcaagaaatctggaccaccacgtattttg
atcctgacgcccacccgtgagctagccatgcaagtggcagatcaggcaaaagaattcgct
gcacatacccatttggatatcgctaccattactggcggcgtagcctatatgaatcacgct
gaaattttcagcgaaaatcaagatattgtcgtcgccactacaggccgtctgctgcaatat
atcaaggaagaaaactttgattgtcgggcagttgaaacacttatccttgatgaagccgat
cgtatgctggatatgggttttgccaacgatattgaaaccatcgcgggtgaaacccgttgg
cgcaaacagaccatgctgttctctgcgactctggaaggggaagccattcgtgattttgct
gaacgtttactggaagatccagttgagattgatgcagaaccgtcacgtcgtgagcgcaaa
aaaatccagcaattttactaccgtgccgataattcggcacacaaaacagccctgctttgc
catttactaaaacaacccgatgtcactaaatccattatttttgttcgcaaacgtgaacgt
gtacacgaacttgcggataaattgcatcaagctggcattaaagcccggtttcttgaaggg
gaaatggtacaggctaaaaggacggaagcagttaagctcctgaacgatggcagtgtcact
gttctggttgcaacagatgtcgctgcccgtggattggatattgatgatatcagccatgtt
ttcaatttcgatttaccacgcaccgccgatgtttatctacaccgtattggccggacagcg
cgtgcaggtcgcaaaggtactgcaattaccttagtggaagcgcatgatcatcctttatta
ggcaaaatcagtcgctatctgaatgaaccactaacgtcgcgagtggttgatgaacttcgc
ccaaccactaaagcaccaagtgacaaagcccgcaataagccatcgaaaaaagtattggct
aaacgtaaagagaaaaagaaagcggaagaatcgaagaaaaaagccaaaatacgtcatcga
gatagtaaaaatatcggtaaacgccgtaaaccttctggtaatccaaaaccagaaacgcca
gtcagtagcgatgcgtaa
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