Photorhabdus laumondii subsp. laumondii TTO1: plu3912
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Entry
plu3912 CDS
T00149
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plu03400
]
plu3912 (sbcD)
DNA repair and recombination proteins [BR:
plu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
plu3912 (sbcD)
Archaeal homologous recombinant proteins
plu3912 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Methyltransf_35
PRS2_N
Motif
Other DBs
NCBI-ProteinID:
CAE16284
Pasteur:
plu3912
UniProt:
Q7N0H6
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All DBs
Position
4586000..4587235
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AA seq
411 aa
AA seq
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MRIIHTSDWHLGQYFFTKSRAAEHQHFLRWLIKQIEHYQVDALIVAGDIFDTGSPPSYAR
ELYNRFVVELQPTGCQLISLGGNHDSVATLNESKELLSCLNTTVIAHAEKDQQKQIKILT
TKQGNAGAILCAVPFLRPRDIMISQAGQSGEQKQLVLQEAIAEHYHRLYQQACELRDELN
LPLPIIATGHLTTVGATVTDSVRDIYIGTLDAFPAQAFPPVDYIALGHIHRPQIVAKSEH
IRYSGSPIPLSFDEVGQEKSVCLVEFTQDKLESIKLLPIPQYQPMQLIKGNLQHIEQQLQ
TFNDYQGEQPVWLDIEVATQDYLHDIQKRIRSMVAELPVEIILLRRSKTQQQNRLAQENR
ETLTELSVNEVFARRLAQSALEDEEHKKRLTTLFEQTLNDIYQAKNKEEQA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattattcacacttcggactggcatcttggccaatatttttttacaaaaagccgg
gctgctgaacatcaacattttctgcgctggctgattaaacagattgaacattatcaggtc
gatgcattaattgttgccggagatatatttgacacgggttcaccacctagctatgcccgt
gaactatataatcgctttgtcgttgaactacaaccgaccggttgtcagttaattagcctt
ggtggtaaccatgattcagtagcaacattaaatgaatcaaaagaactcctttcctgcctg
aataccaccgttattgctcacgcagaaaaagatcaacaaaaacagataaaaatactcacc
accaaacaaggcaatgccggtgcaattctttgtgcagtcccttttctgcggccaagagat
attatgatcagccaggctggtcagtcaggagaacaaaaacagctcgtattacaagaagct
attgcagaacattatcatcgactctatcagcaagcgtgtgaattacgtgatgaattgaat
ttacccttacctatcattgctaccgggcatctgacgaccgttggcgccactgttacagat
tcggtgcgggatatttatattggtacattggatgccttcccggcgcaagctttcccgccg
gtagactatattgcgcttgggcatattcaccggccacaaatagtggctaaatctgaacat
attcgctacagcggttcccctattcctcttagtttcgatgaagtcgggcaagagaaaagt
gtctgtttggtggaatttacccaagacaaactggaatccatcaagcttttacccattccg
caatatcagcccatgcaactcatcaagggcaacctgcaacacattgaacaacagttgcaa
acttttaatgactatcaaggagagcaacccgtctggctggatattgaagttgcaacccaa
gattacctccatgatatccagaaaaggattcgatcaatggttgccgagcttcctgtcgaa
atcattctgctacgacgtagtaaaacacaacaacaaaataggctagcacaagaaaacagg
gaaactctgacagaacttagcgttaacgaggtttttgcccgacggcttgcacaatcagca
ctcgaagatgaagaacataaaaaacgtctgaccacccttttcgaacaaacactgaacgat
atctatcaggctaaaaacaaggaggagcaggcatga
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