Photorhabdus laumondii subsp. laumondii TTO1: plu3913
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Entry
plu3913 CDS
T00149
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plu03400
]
plu3913 (sbcC)
DNA repair and recombination proteins [BR:
plu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
plu3913 (sbcC)
Archaeal homologous recombinant proteins
plu3913 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
SMC_N
cobW
AAA_14
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
CAE16285
Pasteur:
plu3913
UniProt:
Q7N0H5
LinkDB
All DBs
Position
4587232..4590918
Genome browser
AA seq
1228 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHETPR
LTISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPNGNLQAPKVELALSSS
GKILADKIQDKKEKIIEITGLDYGRFTKSILLSQGDFAAFLNAQPNERADLLEELTGTEI
YGILSQQIYQQHKQAQSVLDILQAKASTIDLLTAEQHQQYLEQQQQLTHAESQLNQQIKT
VQHSAQWLTREEELEQLVTENNAILQQAEKALTHAEPQLQKLANSEPAETLRPLLDDKNR
TQYEHQRTSKQLEEMHQQLQQLQQTLTPIQQKVAHADSARAEYQQHRQQQEKLITEQVIP
LDHQIAVQIKELNLTQQQINEQKTVLENRCQQYDTANQRALSFTNQRKQLENYFEQQPYH
QYFGEKLAFWQHQFSWRQEHQQQIDHQTQKVGKLTAEITQLSNNLNKQGEDLKQQIENNQ
PLELAFEQAKQQFFTLQKQYSPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQAAIASHH
IRLQQPEKLLKEFPVQIESIDKQLSDKQQHLSDLTQRIQLEQKIVSLEKERAQLKEGSPC
PLCGAEHHPAIQAYQNIELPKSEQRLKDLRQQFEALQATKISLVNKKEFQQQEYDHILQE
ITDAEPRLNILTQQWQETCAILQTEISLSDKPALELFVQQNQSAHRLCQTQLTEFELAEK
TYQKTEKTVTAHQEYVKEIERNIELSKHQHNILKKQLSELQPEIQQQQHKLTDVIEKMTS
ELQQYNLSLPMLNDTENWLQQRREEWQIYQNCHENWQQIQKEEAVIQNQIESLHKQKEEY
LSHLNRLNQTAQQQKQQLAETQQQRQQLFGEQSVTEITQALQQQSQKLEEMHKQALSHLQ
QAQSSINQLTGAIHETEKNDNQSEQQKQQAEQNFNAALAKSPFADQHAVESALLSQEQRK
ELRQLKEQLEQQQIQANALCQKAAETLQQHRKNRPELLNQYTKSQLTEQLENMTDELKRN
TLQQGELKNLLGNDAIRRQQQKSLLEEISHCRQNYDDWSYLNNLIGSADGAKFRRFAQGL
TLDHLVHLANQRLKKLHGRYDLQRKNSDGLELQVVDTWQADAIRDTKTLSGGESFLVSLA
LALALSDLVSNKTCIDSLFLDEGFGTLDPETLDIALDALDHLNASGKTIGVISHIEAMKE
RIPVQIKVKKINGLGISKLSPEFRYDQQ
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgagtttacggctaaaaaacattaattcattacaaggtgaatggaaaatt
gatttcacagcagagccgtttgccagcagtggtttgttcgccataaccggcccgaccggt
gcgggtaaaaccaccttattggatgcgatctgccttgcgctttatcacgaaaccccacgc
ttgacgatttctacctcacaaaatgagctgatgacccgacacactgcggaatcattggct
gaagtagagtttgaagtgaaaggtgtcgcttaccgtgctttctggagccaacggcgagcg
cgtaatcaacccaatggcaacctgcaagcccctaaagtggaactcgcccttagcagcagt
ggtaaaattctggccgataaaatccaagataagaaagaaaaaatcattgaaattactgga
ttagattacggccgtttcaccaaatccatattgctatcccaaggagatttcgcggctttc
ctcaatgctcagccaaacgaacgggctgatttattggaagagttaaccggcactgaaatt
tacggaattttatcccaacaaatttaccaacaacataaacaagcacaatcagtgctggat
attctgcaagccaaagcatctaccattgatttgctaacggcagagcagcatcaacaatat
ctggaacaacagcaacaactcacccatgcagaatcacaactcaatcagcagataaaaaca
gtgcaacattcggcgcaatggctgacacgtgaagaagaacttgagcaactcgtcactgaa
aataacgctatcttacagcaggcagaaaaagcgcttactcatgcagagccgcaactgcaa
aaactggctaacagtgaacccgcagaaacactgcgcccattgctggatgataaaaaccga
acacaatatgaacatcagagaaccagcaaacagttggaagagatgcatcagcaacttcaa
caactgcaacagacgctcacaccgatacagcaaaaggtggctcatgcagattctgccaga
gcagagtatcaacagcaccggcaacaacaagaaaagctgataacagaacaggtgattcca
ttagatcatcaaattgcggtacagattaaagagctcaatcttactcagcaacaaatcaac
gaacagaaaacggtgcttgaaaaccgttgtcaacaatatgacacagcaaatcagcgcgcc
ttatcattcaccaatcaaagaaaacaactggaaaactatttcgaacaacaaccttatcat
caatatttcggtgaaaaactggctttttggcaacaccaattctcgtggcggcaagaacat
caacaacaaattgaccaccaaacacaaaaagtaggcaagctcactgccgaaatcacgcaa
cttagcaataacctgaacaaacaaggggaagacttaaaacaacaaattgaaaataaccaa
ccgctggaactggcatttgaacaggccaagcaacaattttttactctgcaaaaacaatat
tcgccagagaaattaaaaaaacaattaactcaatatcaggaacagctaccgctgcaacat
aaactggagatcctgtcgccacaaatcttacaattacaagccgctattgccagtcatcat
attcgcttacaacaaccggaaaaattattaaaagaatttcctgttcaaattgaatccatc
gataaacaactctcagacaaacagcaacatttatccgatcttactcaacgtattcagtta
gaacaaaagattgtcagtctggaaaaagagcgggcacagctcaaggaaggttctccttgc
ccactatgcggtgctgaacatcatcctgcaattcaggcttatcaaaatattgaactgcca
aaatcagaacaacggttaaaagatttacgccagcaatttgaagcgctgcaagccaccaaa
atatcattggttaataaaaaagagttccaacagcaagaatacgaccatattttacaagaa
attactgatgctgaaccacgattgaatatattaacgcaacaatggcaggaaacttgcgca
atattacagaccgaaatttctctttcagataaacccgctcttgaactatttgtgcaacaa
aaccaatcggctcatcggctttgccaaactcaattaaccgaatttgaactggcagaaaaa
acgtaccagaaaacagaaaaaacagtgaccgctcatcaagaatacgttaaagaaattgaa
cgaaatattgaactgagtaagcatcaacacaatatactgaaaaaacagttatctgaattg
caaccagagatacaacaacagcagcataaactaactgatgtcatcgaaaaaatgacgtca
gaattacagcaatataatttatccctgccaatgctgaatgatactgaaaactggctgcaa
caacgtagagaagagtggcagatataccaaaactgtcatgaaaactggcaacagatccaa
aaagaagaagcggtcattcaaaatcaaattgaatcattgcataaacagaaagaagaatat
ctctcccatctaaataggcttaatcaaacagctcaacaacagaaacagcaactcgcagag
acacaacaacagcgccaacaactatttggtgaacaatccgttacggaaatcactcaggca
ttacaacaacaatctcaaaagcttgaggaaatgcacaaacaagcattgtcacatctgcaa
caagcgcaatccagcatcaaccaactgaccggtgccattcatgagacagaaaaaaacgat
aaccagtctgagcaacaaaaacagcaggcagaacagaatttcaatgctgcattagcaaaa
agcccatttgccgatcagcacgccgttgaatcagcgctgttatcgcaagagcaacgtaaa
gaattgcgacaacttaaagaacagcttgaacaacagcagatacaagccaacgccctatgc
cagaaagcagcagaaaccctgcaacaacatcggaaaaatcgccctgagttacttaatcaa
tatacaaaatcacaactgaccgaacagttggaaaacatgactgatgagctaaaaagaaac
accttacaacaaggagagctgaaaaacctgcttggtaatgatgcaatacgccgtcaacag
caaaaatccttattggaagagatcagccattgccgacaaaattatgatgactggagttat
cttaataacctgattggttcggctgatggtgctaaattccgtcgctttgctcaaggatta
acactggatcatttggttcatctcgccaatcaacggctgaaaaaattgcacggacgctac
gatttgcaacgtaaaaacagtgatggtcttgaactacaagtggttgatacctggcaagcc
gatgctattcgtgataccaaaacgctttccggtggcgaaagttttctggtcagcctcgcc
ctggctttagcactatctgatttagtcagcaataaaacctgtattgattcactgttcctg
gatgaaggctttggcacacttgatccagaaacccttgatattgctcttgatgcactggat
catttaaatgcttccggtaaaaccataggtgttatcagccacattgaagctatgaaagaa
cggatacctgtacagattaaggttaaaaaaattaatgggcttgggataagtaaactctca
cctgagtttcgttatgatcaacaatag
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integrated database retrieval system
