Photorhabdus laumondii subsp. laumondii TTO1: plu4452
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Entry
plu4452 CDS
T00149
Name
(GenBank) unnamed protein product; Similar to ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Pathway
plu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
plu4452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plu03019
]
plu4452
03400 DNA repair and recombination proteins [BR:
plu03400
]
plu4452
Enzymes [BR:
plu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
plu4452
Messenger RNA biogenesis [BR:
plu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
plu4452
DNA repair and recombination proteins [BR:
plu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
plu4452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
Cas3-like_C_2
RecQ_Zn_bind
AAA_30
gp12-short_mid
Tex_N
Motif
Other DBs
NCBI-ProteinID:
CAE16824
Pasteur:
plu4452
UniProt:
Q7MZ49
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All DBs
Position
5204663..5206765
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AA seq
700 aa
AA seq
DB search
MNRAQAQQLLQTALANPNAEFHDGQWEAIDALVNQRQKLLVVQRTGWGKSSVYFISTKIF
RDRGMGPTIIVSPLLALMRNQIESAQRLRIIAETMNSTNTADWQTVTQRIINNQIDCLLI
SPERLANDNFIETVLHPIADRIALMVIDEAHCISDWGHDFRPDYRRIVNILRQLPPNTPV
LGTTATANNRVVADIQTQLGNIQIQRGPLIRESLSLQTMVLPDQSSRLAWLAQVIPTLHG
TGIVYTLTVRDAEQVANWLNVNGINARAYHSSIEADGFENSNDYRQYLEELLLTNQLKVL
VATTALGMGYDKPDLSFVIHYQAPGSIVAYYQQVGRAGRGIDNAIGVLISGIEDQDIHKF
FRNSAFPSETQVNEILQVLDNSDGLSLRSIEEQTNLRYGQIEKVLKLLSTENTAPVIKVG
NLWRRIPVPYAMDRTRIAHLTNQRKQEWAEVQAYLSDTRCKMTFLRRVLDDHDPTPCGKC
SSCIGQPVVNQAINPVLVHQAGTFLKHAEMIIQPRKQVATSNRAFPTYCFPRQLGCLVAQ
PGRVLSRWGDAGWGKTVIENKHSGYFSDELVDAMAEMISQRWQPNPSPTWVCCVPSLRHP
NLVPAFACRLAQRLNLTFVDAVAKVQDNQPQKEQQNSFHQCHNLDGVFEITQIIQNQPVL
LIDDIVDSGWTLTVIAALLQQAGSGIVYPAALASSSVKDS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagctcaggcccaacaactactacaaactgcactagccaatccaaatgctgag
tttcacgatggtcagtgggaagctattgatgctttagttaaccaacggcagaaactgttg
gtagtacagcgtactggctggggtaaaagctcagtttactttatcagcaccaaaattttc
cgtgatcgcggcatggggccgacgattattgtttctcctttgctggctctgatgcgtaac
cagattgagtccgcccagcgcctgcgcatcatagccgagactatgaattccaccaataca
gcggactggcagacggtgacacaaaggattataaataatcaaatagattgcctgctgatt
tctcctgagcggctcgccaatgataacttcattgaaaccgtgcttcatcctatcgctgac
cgtattgctctgatggtgatcgacgaagcccactgcatctccgactggggccatgacttc
cgcccagactatcggcgtatagtcaatattttgcgccagttgccacctaatacaccggta
ttaggcacaacggccactgccaataaccgcgtggtggctgatatccaaacacaactgggt
aatatccagatccagcgtggtccactgatccgtgaaagcctctcgctacaaactatggtg
ctgcctgatcaatcctctcgcctagcttggttggcgcaagtgattcccacattgcatggt
actggcattgtgtacaccttaacagtgcgtgatgccgaacaggtagcaaattggttgaac
gtcaatggcataaatgccagagcctaccatagcagtattgaggctgatggttttgaaaac
agtaacgattaccgacaatatcttgaagagttattgctaaccaatcaacttaaggtgctg
gtggcaactactgcattgggtatggggtacgacaagccggacttaagctttgtgattcac
tatcaagcaccaggttctatcgtggcttactaccagcaggttggccgcgcagggcgtggt
atcgacaacgctattggtgtgttgatatctggtatagaagatcaagatattcataagttt
ttcaggaattcggcattcccatcagaaactcaggtaaacgaaattttgcaagtactagat
aatagtgatggtttatcgcttcgtagcattgaagagcaaaccaacctacgctatggccag
attgaaaaggtattaaaactgctaagtacagagaacaccgctcctgtgattaaagtcgga
aacttatggcgcagaatacccgtgccttatgctatggatcgcacccgtatcgctcacctc
accaaccagcgtaagcaagagtgggctgaagtacaggcttatctgtcagataccagatgt
aagatgactttcttgcgccgtgtactggatgatcacgaccctacaccttgtggcaaatgc
tcgtcatgcatcggccagcctgttgttaatcaggctattaatccagtgttagttcatcag
gcaggcacttttcttaaacatgccgaaatgattatccagccaagaaaacaggtagcaact
tctaatcgagcctttcctacatattgttttccacggcagttaggttgcttagttgctcag
ccaggtagggttctctctcgatggggagatgctggttggggaaagactgttattgaaaat
aaacattcgggttatttttctgatgaactagttgatgctatggctgaaatgatctcacag
cgttggcagcctaatcctagtccaacttgggtgtgttgtgttccttccttaagacacccg
aatttagtccctgcatttgcatgtcgtttagcacaaagattgaacctgacatttgttgat
gcggtagcaaaagttcaagataaccagccccaaaaggaacaacaaaatagttttcatcaa
tgccacaaccttgacggtgtttttgagataacacaaattatacaaaatcaaccagtactc
cttatcgacgacatcgttgactctggttggactcttaccgttattgcagctttgttacag
caagcgggtagtggtattgtatatcccgcagcacttgcctcttcttcggtgaaagactca
tga
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