Photorhabdus laumondii subsp. laumondii TTO1: plu4525
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Entry
plu4525 CDS
T00149
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (PNPase) (CAP87K)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plu
Photorhabdus laumondii subsp. laumondii TTO1
Pathway
plu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
plu4525 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plu03019
]
plu4525 (pnp)
03016 Transfer RNA biogenesis [BR:
plu03016
]
plu4525 (pnp)
Enzymes [BR:
plu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
plu4525 (pnp)
Messenger RNA biogenesis [BR:
plu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
plu4525 (pnp)
Transfer RNA biogenesis [BR:
plu03016
]
Prokaryotic type
tRNA degradation factors
plu4525 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
S1_RRP5
KH_2
aRib
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_SLS1_2
DUF3016
Motif
Other DBs
NCBI-ProteinID:
CAE16897
Pasteur:
plu4525
UniProt:
Q7MYZ0
LinkDB
All DBs
Position
complement(5284616..5286745)
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AA seq
709 aa
AA seq
DB search
MLNPIVRKFQYGQHTVAIETGMMARQATAAVMVNMDDTAVFVTVVGQKKVKEGQDFFPLT
VNYQERTYAAGRVPGSFFRREGRPGEGETLVARLIDRPLRPLFPDGFLNEVQIVATVVSV
NPQVNPDIVAMIGASAVLALSGIPFNGPIGAARVGYINDQYVLNPTSDELKNSRLDLVVS
GTAGAVLMVESEADILTEEQMLGAVVFGHEQQQVVIDNINALAAEAGKEKWNWVPESVNQ
ALHDRVAGLAEDRLGDAYRITEKQERYAQVDAIKEEVTAALLEQDEALEEAEIHEILGSL
EKKVVRSRVLRGEPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQIIDELMGERTDRFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVAAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDDNFVVLSD
ILGDEDHLGDMDFKVAGSCEGISALQMDIKIEGITREIMQIALNQAKGARLHILSVMEQA
INSPRNDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKHAISRIEEITAEIEVARIYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVADYLQVGQEVSVKVLEIDRQGRVRLSIKEATVGVIVEDTPVAPQSAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgattgttcgtaaatttcaatatggccaacataccgttgctatcgaaaca
ggtatgatggcacgccaggccacagctgctgtcatggtcaatatggatgacacggctgta
tttgtcactgttgttggtcaaaagaaagtaaaagaaggtcaggatttctttcctctgact
gttaactatcaggagcgtacttatgctgctggtcgtgttcctggcagtttctttcgtcgt
gaaggtcgtccaggtgaaggagaaacgttagtcgctcgtttgattgatcgtcctctgcgt
cctctgttcccggacggtttcctgaacgaggtgcagattgtagcaacagttgtttctgtt
aacccgcaagttaatccagatattgttgcaatgatcggtgcttctgctgtgctggcacta
tctggtatcccgttcaatggtccaattggtgctgctcgcgttggttatattaatgatcag
tatgtgctgaacccaaccagtgatgagctaaaaaatagccgtttagatctggtggtttca
ggtactgctggtgctgttctgatggttgagtctgaagcagacattctaactgaagagcaa
atgttaggtgcggtagtattcggtcatgaacaacaacaggtggttattgataacattaat
gcgttggctgcggaagcaggcaaagaaaaatggaattgggtgccagaatctgttaatcaa
gcgttgcatgaccgtgtagctggattggcagaagaccgtttgggtgatgcttatcgtatc
actgaaaaacaggagcgttatgctcaggttgatgctatcaaagaggaagttacggcagca
ctgctggaacaggatgaagctttagaggaagctgaaatccatgaaattctgggtagctta
gagaaaaaagttgttcgtagccgcgtcttgcgtggtgaaccacgtattgatggtcgtgaa
aaagatatggtgcgtgcattggatgtacgtactggtgttctgcctcgaactcatggctct
gcgctgtttacccgtggtgaaactcaggctttggttactgcgactttgggtacagaacgt
gatgcacagatcattgacgagttgatgggagagcgcacagatcgtttcctactgcactac
aacttcccgccatattctgttggtgaaacaggtatgatgggttcaccaaaacgtcgtgaa
attggtcatggtcgtttggccaaacgtggtgtggcggcagttatgccaaaagctaacgaa
ttcccatataccgttcgggtcgtttctgaaatcacggaatcaaacggctcgtcttcaatg
gcatctgtttgtggtgcatctcttgcgttgatggatgcaggtgtgccgattaaagctgct
gttgctggtattgcaatgggattagtgaaagaagacgataattttgttgttctgtctgac
atcttgggtgatgaagatcatttgggagacatggactttaaagtagcgggtagctgtgaa
ggtatcagcgcgctgcaaatggacatcaaaattgaaggcattacccgtgaaattatgcaa
attgctctgaatcaggcaaaaggtgcgcgtttgcatatcctgagtgtaatggaacaggca
attaatagcccacgtaatgatatttctgaatttgcaccacgtattcacactattaagatc
aatcctgataagatcaaagatgttatcggtaaaggtggttcagttatccgtgcactgaca
gaagaaaccggtaccaccattgaaattgaagatgatggcacagtgaaaattgctgcaact
gatggtgaaaaagcaaaacatgccatcagtcgcattgaagaaataactgctgagatcgaa
gtagctcgcatttacactggtaaagtaacccgtatcgttgattttggcgcgtttgttgct
atcggtggtggtaaagaaggtctggtacatatttctcagattgctgataagcgtgttgag
aaagtggctgactatttgcaggttggtcaggaagtctcagttaaagttctggaaattgat
cgccagggtcgtgttcgtctgagtattaaagaagcgacagtcggagtaattgtcgaggat
acaccagtggcaccacaatcagcagaataa
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